RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	C12orf76	Q8N812	135 aa	Predicted RBP	4.57	□□□□□ -1.68
FN1-222	ENST00000485567	FAM71D	Q8N9W8	422 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	PROKR1	Q8TCW9	393 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	ZNF503	Q96F45	646 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	PPP1R10	Q96QC0	940 aa	Known RBP	4.57	□□□□□ -1.68
FN1-222	ENST00000485567	THAP7	Q9BT49	309 aa	Predicted RBP	4.57	□□□□□ -1.68
FN1-222	ENST00000485567	PLEKHA2	Q9HB19	425 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	DUSP22	Q9NRW4	184 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	DLL3	Q9NYJ7	618 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	CCNL1	Q9UK58	526 aa	Predicted RBP	4.57	□□□□□ -1.68
FN1-222	ENST00000485567	ASAP1	Q9ULH1	1129 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	TBX20	Q9UMR3	447 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	SLC12A4	Q9UP95	1085 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	LAS1L	Q9Y4W2	734 aa	Known RBP	4.57	□□□□□ -1.68
FN1-222	ENST00000485567	AFG3L2	Q9Y4W6	797 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	PCDHA10	Q9Y5I2	948 aa		4.57	□□□□□ -1.68
FN1-222	ENST00000485567	C3orf70	A6NLC5	250 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567		F5H0A9	414 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	CA12	O43570	354 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	DDX58	O95786	925 aa	Known RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	IFIT1	P09914	478 aa	Known RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	ATP1A3	P13637	1013 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	CHN1	P15882	459 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	DUSP1	P28562	367 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	GRK5	P34947	590 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	PSMC2	P35998	433 aa	Known RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	DIO1	P49895	249 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	CTSW	P56202	376 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	EFEMP1	Q12805	493 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	PTPA	Q15257	358 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	BAK1	Q16611	211 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	KAZN	Q674X7	775 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	DENND1B	Q6P3S1	775 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	DPY19L3	Q6ZPD9	716 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	LRRC8D	Q7L1W4	858 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	LINC00476	Q8WZB0	136 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	ST8SIA4	Q92187	359 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	TFAP2B	Q92481	460 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	EDC3	Q96F86	508 aa	Known RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	PRR11	Q96HE9	360 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	SNX18	Q96RF0	628 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	FSD1L	Q9BXM9	530 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	SLC2A4RG	Q9NR83	387 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	SYBU	Q9NX95	663 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	GAR1	Q9NY12	217 aa	Known RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	RAB21	Q9UL25	225 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	TRPC5	Q9UL62	973 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-222	ENST00000485567	SCIN	Q9Y6U3	715 aa		4.56	□□□□□ -1.68
FN1-222	ENST00000485567	C1QTNF3-AMACR	E9PGA6	284 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	FOXD2	O60548	495 aa	Predicted RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	URI1	O94763	535 aa	Predicted RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	BAIAP3	O94812	1187 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	NPS	P0C0P6	89 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	NDUFB7	P17568	137 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	IGFBP2	P18065	325 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	CAPN3	P20807	821 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	ITPKB	P27987	946 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	CYP2C18	P33260	490 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	PNPLA4	P41247	253 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	GRIA3	P42263	894 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	JAK3	P52333	1124 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	RCAN1	P53805	252 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	PSG6	Q00889	435 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	CFHR3	Q02985	330 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	PDCL	Q13371	301 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	AARS2	Q5JTZ9	985 aa	Known RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	MIIP	Q5JXC2	388 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	LIPM	Q5VYY2	423 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	ACAD10	Q6JQN1	1059 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	MZT2B	Q6NZ67	158 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	FAM180B	Q6P0A1	224 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	TMTC2	Q8N394	836 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	LCORL	Q8N3X6	602 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	NME8	Q8N427	588 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	ANKRD44	Q8N8A2	993 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	RRP36	Q96EU6	259 aa	Known RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	TRMT61A	Q96FX7	289 aa	Known RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	LENG8	Q96PV6	779 aa	Predicted RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	MLST8	Q9BVC4	326 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	AGXT2	Q9BYV1	514 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	PAIP1	Q9H074	479 aa	Known RBP	4.55	□□□□□ -1.68
FN1-222	ENST00000485567	CDCP1	Q9H5V8	836 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	GOLGA2P5	Q9HBQ8	144 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	IRAK4	Q9NWZ3	460 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	SEMA5B	Q9P283	1151 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	FZD4	Q9ULV1	537 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	CYP46A1	Q9Y6A2	500 aa		4.55	□□□□□ -1.68
FN1-222	ENST00000485567	SPATA31A1	Q5TZJ5	1347 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	AGAP5	A6NIR3	686 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	QSOX1	O00391	747 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	KLK10	O43240	276 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	SUV39H1	O43463	412 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ORC4	O43929	436 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	GUCY1B2	O75343	617 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ESRRB	O95718	433 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	TTLL1	O95922	423 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	C1R	P00736	705 aa		4.54	□□□□□ -1.68
FN1-222	ENST00000485567	MBP	P02686	304 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-222	ENST00000485567	ENG	P17813	658 aa		4.54	□□□□□ -1.68

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