RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 ADAM22Q9P0K1 906 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 DEC1Q9P2X7 70 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 ACSL4O60488 711 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 CYBBP04839 570 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 TNFAIP3P21580 790 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 TNFRSF4P43489 277 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 SLC6A11P48066 632 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 PITX1P78337 314 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 KLHL30Q0D2K2 578 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 MTAPQ13126 283 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 ARID5BQ14865 1188 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 SLC25A52Q3SY17 297 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 MPPE1Q53F39 396 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 FAM133BQ5BKY9 247 aaKnown RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 HGSNATQ68CP4 663 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 TPGS1Q6ZTW0 290 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 ZNF571Q7Z3V5 609 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 DRC7Q8IY82 874 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 ADAM32Q8TC27 787 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 KCNV2Q8TDN2 545 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 P2RY11Q96G91 374 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 BTN2A3PQ96KV6 586 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 SLC2A11Q9BYW1 496 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 FAM204AQ9H8W3 233 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 PRMT8Q9NR22 394 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 RBM12Q9NTZ6 932 aaKnown RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 FBXO4Q9UKT5 387 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 STAP1Q9ULZ2 295 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 SLC27A6Q9Y2P4 619 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 MYO15AQ9UKN7 3530 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 KIAA1549LQ6ZVL6 1849 aa18.48■□□□□ 0.55
SREBF1-213ENST00000485080 MYO18AQ92614 2054 aaKnown RBP18.48■□□□□ 0.55
SREBF1-213ENST00000485080 NEDD8-MDP1E9PL57 170 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 K7EQS6 105 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 ATG13O75143 517 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 KAT7O95251 611 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 F9P00740 461 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 APOEP02649 317 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 APODP05090 189 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 CISD3P0C7P0 127 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 CHRM1P11229 460 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-213ENST00000485080 CCR1P32246 355 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 ZNF528Q3MIS6 628 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 ZC3H12AQ5D1E8 599 aaKnown RBP18.47■□□□□ 0.55
SREBF1-213ENST00000485080 OTUD1Q5VV17 481 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-213ENST00000485080 MAML2Q8IZL2 1156 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-213ENST00000485080 C3orf20Q8ND61 904 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 C11orf70Q9BRQ4 267 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 ARHGEF4Q9NR80 690 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 SPATA6Q9NWH7 488 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-213ENST00000485080 DDIT4Q9NX09 232 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 STARD13Q9Y3M8 1113 aa18.47■□□□□ 0.55
SREBF1-213ENST00000485080 TCRBV5S1A1TA0A578 114 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 ENDOD1O94919 500 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 SERPING1P05155 500 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 FLT3P36888 993 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 CXCR3P49682 368 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 CCR3P51677 355 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 MESP2Q0VG99 397 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 ANGPT1Q15389 498 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 HSF5Q4G112 596 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-213ENST00000485080 PIK3R6Q5UE93 754 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 NADSYN1Q6IA69 706 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 Q6ZS52 159 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 NUDT18Q6ZVK8 323 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 MCOLN2Q8IZK6 566 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 TERB1Q8NA31 727 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 SEPT11Q9NVA2 429 aaKnown RBP18.46■□□□□ 0.55
SREBF1-213ENST00000485080 DNAJC17Q9NVM6 304 aaKnown RBP18.46■□□□□ 0.55
SREBF1-213ENST00000485080 SLC12A6Q9UHW9 1150 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 PAXBP1Q9Y5B6 917 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 ATG2BQ96BY7 2078 aa18.46■□□□□ 0.55
SREBF1-213ENST00000485080 C2CD4BA6NLJ0 364 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 SIGLEC16A6NMB1 481 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 GOLGA8SH3BPF8 625 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 M0QYT0 321 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 DDX3XO00571 662 aaKnown RBP eCLIP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 LAMTOR5O43504 91 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 RNF40O75150 1001 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 HOXA6P31267 233 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 CASP14P31944 242 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 RNASE9P60153 205 aaKnown RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 MRPS21P82921 87 aaKnown RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 BRMS1LQ5PSV4 323 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 ACBD5Q5T8D3 534 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 GRAMD4Q6IC98 578 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 TRNP1Q6NT89 227 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 NAT16Q8N8M0 369 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 ATP6V0D2Q8N8Y2 350 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 ZNF557Q8N988 423 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 USP33Q8TEY7 942 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 NELL1Q92832 810 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 TMA16Q96EY4 203 aaKnown RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 FAM126AQ9BYI3 521 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-213ENST00000485080 ADAM33Q9BZ11 813 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 RBSNQ9H1K0 784 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms