RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SLC12A3P55017 1021 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 WNT7BP56706 349 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 ACTN3Q08043 901 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 LINC01559Q495D7 138 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 CTXN3Q4LDR2 81 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 EARS2Q5JPH6 523 aaKnown RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 STXBP5Q5T5C0 1151 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 KIAA1841Q6NSI8 718 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 KCNT2Q6UVM3 1135 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 MOGAT3Q86VF5 341 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 SMG8Q8ND04 991 aaKnown RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 KIFAP3Q92845 792 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF764Q96H86 408 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 INTS4Q96HW7 963 aaKnown RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 IGSF21Q96ID5 467 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 MTRQ99707 1265 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 LXNQ9BS40 222 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 PHF7Q9BWX1 381 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 TRIM5Q9C035 493 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 TMPRSS4Q9NRS4 437 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 KCND1Q9NSA2 647 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 KRT82Q9NSB4 513 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 PRMT7Q9NVM4 692 aaPredicted RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 ADGRE2Q9UHX3 823 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 RASAL2Q9UJF2 1139 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 SLC13A4Q9UKG4 626 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 SIK3Q9Y2K2 1263 aa5.57□□□□□ -1.52
CCDC39-205ENST00000485055 NOSIPQ9Y314 301 aaKnown RBP5.57□□□□□ -1.52
CCDC39-205ENST00000485055 DENND3A2RUS2 1198 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PROM1O43490 865 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TBX10O75333 385 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CAPNS1P04632 268 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CD9P21926 228 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 MARK3P27448 753 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ATP5DP30049 168 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CDC25AP30304 524 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 HSPA7P48741 367 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ALDH3A2P51648 485 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ATP2C1P98194 919 aaPredicted RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ZBTB16Q05516 673 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CALCRLQ16602 461 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 DCAF4L1Q3SXM0 396 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 NOMO2Q5JPE7 1267 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 BROXQ5VW32 411 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 DCLRE1AQ6PJP8 1040 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PLEKHM3Q6ZWE6 761 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 GPR149Q86SP6 731 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 UBALD2Q8IYN6 164 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ZBTB9Q96C00 473 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM41AQ96HV5 264 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 C16orf45Q96MC5 204 aaPredicted RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PYM1Q9BRP8 204 aaKnown RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 IQCGQ9H095 443 aaKnown RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ADAM7Q9H2U9 754 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PSD3Q9NYI0 1048 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 AIPL1Q9NZN9 384 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 SLC30A1Q9Y6M5 507 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 MKI67P46013 3256 aaKnown RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CITO14578 2027 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 AGRPO00253 132 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 RFXAPO00287 272 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 UBE2CO00762 179 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ABLIM1O14639 778 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 GALTP07902 379 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 OR52Z1P0C646 297 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ALDH9A1P49189 494 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CCR5P51681 352 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 SEC24CP53992 1094 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 KRT17Q04695 432 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 MAPK7Q13164 816 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 BMPR2Q13873 1038 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 MPEG1Q2M385 716 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 NOTUMQ6P988 496 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 DENND1CQ8IV53 801 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 MIER2Q8N344 545 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 GALNT15Q8N3T1 639 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 GOLGA6L1Q8N7Z2 621 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM145Q8NBT3 493 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 LRRN4CLQ8ND94 238 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CEP70Q8NHQ1 597 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 ERMNQ8TAM6 284 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CEP76Q8TAP6 659 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PRPF31Q8WWY3 499 aaKnown RBP5.56□□□□□ -1.52
CCDC39-205ENST00000485055 EDAQ92838 391 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PTP4A1Q93096 173 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 CHFRQ96EP1 664 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 EPN3Q9H201 632 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PDCL3Q9H2J4 239 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 NDST4Q9H3R1 872 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 TBCCD1Q9NVR7 557 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 SALL4Q9UJQ4 1053 aa5.56□□□□□ -1.52
CCDC39-205ENST00000485055 PROB1E7EW31 1015 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 H0YCG3 227 aa5.55□□□□□ -1.52
CCDC39-205ENST00000485055 DDX39AO00148 427 aaKnown RBP5.55□□□□□ -1.52
CCDC39-205ENST00000485055 NPC1O15118 1278 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms