RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ODF3L2Q3SX64 289 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 CCDC144NLQ6NUI1 221 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 ZNF517Q6ZMY9 492 aaPredicted RBP3.77□□□□□ -1.81
VPS50-216ENST00000484954 BEND5Q7L4P6 421 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 GJA10Q969M2 543 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 MSI2Q96DH6 328 aaKnown RBP3.77□□□□□ -1.81
VPS50-216ENST00000484954 SNX27Q96L92 541 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 COLEC11Q9BWP8 271 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 CDCP1Q9H5V8 836 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 RGL1Q9NZL6 768 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 HS3ST3B1Q9Y662 390 aa3.77□□□□□ -1.81
VPS50-216ENST00000484954 A0A0G2JK05 382 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 MYMKA6NI61 221 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 CD8B2A6NJW9 211 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 ZNF814B7Z6K7 855 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 H3BNX3 289 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 INSIG1O15503 277 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 TRIM27P14373 513 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 TNFSF4P23510 183 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 TKTP29401 623 aaKnown RBP3.76□□□□□ -1.81
VPS50-216ENST00000484954 ARL13BQ3SXY8 428 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 FAM209BQ5JX69 171 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 ACSM6Q6P461 480 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 COLCA1Q6ZS62 124 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 FAM57BQ71RH2 274 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 PELI3Q8N2H9 469 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 TXLNBQ8N3L3 684 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 CCDC150Q8NCX0 1101 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 OR52L2PQ8NGH6 319 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 PARD3BQ8TEW8 1205 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 GRAMD1AQ96CP6 724 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 C18orf8Q96DM3 657 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 MCRS1Q96EZ8 462 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 ELOVL1Q9BW60 279 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS50-216ENST00000484954 POT1Q9NUX5 634 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 MSRB1Q9NZV6 116 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 FNIP2Q9P278 1114 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 COG5Q9UP83 839 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 SQORQ9Y6N5 450 aa3.76□□□□□ -1.81
VPS50-216ENST00000484954 TRBV5-3A0A0A0MS03 114 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 CTIFO43310 598 aaKnown RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 UGDHO60701 494 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 KAT7O95251 611 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 CRYABP02511 175 aaKnown RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 ALPLP05186 524 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 SRGAP2BP0DMP2 458 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 SNHG28P0DPA3 235 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 PEPDP12955 493 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 B4GALNT1Q00973 533 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 DMWDQ09019 674 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 IFIT5Q13325 482 aaKnown RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 PGM5Q15124 567 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 TWIST1Q15672 202 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 P3H1Q32P28 736 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 MSANTD2Q6P1R3 559 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 USP17L6PQ6QN14 398 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 RHPN2Q8IUC4 686 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 ZDHHC17Q8IUH5 632 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 MMP21Q8N119 569 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 ARL14EPQ8N8R7 260 aaPredicted RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 PJA1Q8NG27 643 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 NSMCE1Q8WV22 266 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 ZNF845Q96IR2 970 aaPredicted RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 C8orf48Q96LL4 319 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 GPR78Q96P69 363 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 SENP7Q9BQF6 1050 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 TRMOQ9BU70 441 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 RNF26Q9BY78 433 aaPredicted RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
VPS50-216ENST00000484954 STARD7Q9NQZ5 370 aa3.75□□□□□ -1.81
VPS50-216ENST00000484954 FAM90A10PA6NDY2 464 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 B4DGG1 531 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 J3KTA2 159 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 M0QYT0 321 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 PCDH17O14917 1159 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TLX3O43711 291 aaPredicted RBP3.74□□□□□ -1.81
VPS50-216ENST00000484954 TAF5LO75529 589 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 NDUFB8O95169 186 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 VIPP01282 170 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 CD63P08962 238 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 RFPL3SP0C7P2 107 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 MATN1P21941 496 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 SCP2P22307 547 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 GSTM5P46439 218 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TM4SF4P48230 202 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 HTR6P50406 440 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 RAPGEF1Q13905 1077 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 MAPKAPK3Q16644 382 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 LONRF1Q17RB8 773 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 MIDNQ504T8 468 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 NUGGCQ68CJ6 796 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TTLL5Q6EMB2 1281 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 TLDC1Q6P9B6 456 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 DHRS13Q6UX07 377 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 CCAR1Q8IX12 1150 aaKnown RBP3.74□□□□□ -1.81
VPS50-216ENST00000484954 LAS2Q8IYD9 372 aa3.74□□□□□ -1.81
VPS50-216ENST00000484954 ASB12Q8WXK4 309 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms