RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 CBLL1Q75N03 491 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 MON1AQ86VX9 555 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 TP53INP2Q8IXH6 220 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 AOPEPQ8N6M6 819 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 UBR7Q8N806 425 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 AGBL5Q8NDL9 886 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ZSCAN18Q8TBC5 510 aaPredicted RBP9.4□□□□□ -0.9
COL8A1-207ENST00000483969 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 GATA6Q92908 595 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ELSPBP1Q96BH3 223 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 KCNK16Q96T55 309 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 TCF12Q99081 682 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 SMOQ99835 787 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 TTLL2Q9BWV7 592 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 SLC46A2Q9BY10 475 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 EPHX3Q9H6B9 360 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 TRPV4Q9HBA0 871 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 PNPLA8Q9NP80 782 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 APEX2Q9UBZ4 518 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.9
COL8A1-207ENST00000483969 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
COL8A1-207ENST00000483969 KRTAP4-8A0A0G2JLE6 195 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 MED7O43513 233 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 KRT5P13647 590 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 AVPR1AP37288 418 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 GRIA4P48058 902 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 COPB1P53618 953 aaKnown RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CACNA2D1P54289 1103 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CYP4F8P98187 520 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 TAF10Q12962 218 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 NCAPHQ15003 741 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 ARHGAP44Q17R89 818 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF423Q2M1K9 1284 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 ZSCAN23Q3MJ62 389 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 FILIP1LQ4L180 1135 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 TANGO2Q6ICL3 276 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 ARID3BQ8IVW6 561 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 YAF2Q8IY57 180 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CMTM8Q8IZV2 173 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 MAB21L3Q8N8X9 362 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 FGF14Q92915 247 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 KAT5Q92993 513 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 TRMT61BQ9BVS5 477 aaKnown RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 THG1LQ9NWX6 298 aaKnown RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 OBP2AQ9NY56 170 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 IL37Q9NZH6 218 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CHORDC1Q9UHD1 332 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-207ENST00000483969 EGFL7Q9UHF1 273 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 DNAJC12Q9UKB3 198 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 CITO14578 2027 aa9.39□□□□□ -0.91
COL8A1-207ENST00000483969 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 FAM170BA6NMN3 283 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 BEST1O76090 585 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 B3GALT4O96024 378 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 USP17L7P0C7H9 530 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 SRFP11831 508 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF18P17022 549 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 HDCP19113 662 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 USP8P40818 1118 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 SLC5A3P53794 718 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 BPIFB4P59827 614 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 PFKPQ01813 784 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 SIGLEC14Q08ET2 396 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 IFRD2Q12894 506 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-207ENST00000483969 KLHDC7AQ5VTJ3 777 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 TXNDC8Q6A555 127 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 LCLAT1Q6UWP7 414 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 TMEM150AQ86TG1 271 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 MFSD6LQ8IWD5 586 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 CELF5Q8N6W0 485 aaKnown RBP9.38□□□□□ -0.91
COL8A1-207ENST00000483969 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 FBXO32Q969P5 355 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 RPP25Q9BUL9 199 aaKnown RBP9.38□□□□□ -0.91
COL8A1-207ENST00000483969 SEMA6CQ9H3T2 930 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 ACSS3Q9H6R3 686 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms