RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 PROB1E7EW31 1015 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 H0Y858 1186 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 CCDC188H7C350 402 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 SRGAP2O75044 1071 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 CLASP2O75122 1294 aaKnown RBP14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ZMYND10O75800 440 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 HMGA1P17096 107 aaKnown RBP14.51□□□□□ -0.09
SMAD9-204ENST00000483941 GJC1P36383 396 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ATP5C1P36542 298 aaKnown RBP14.51□□□□□ -0.09
SMAD9-204ENST00000483941 CXCR3P49682 368 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 NUBP1P53384 320 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 TFDP2Q14188 446 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 PPP2R5DQ14738 602 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 LONRF2Q1L5Z9 754 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 TFDP3Q5H9I0 405 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 C10orf120Q5SQS8 335 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ASCL5Q7RTU5 278 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF572Q7Z3I7 529 aaPredicted RBP14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ARFGAP1Q8N6T3 406 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 RUNDC3BQ96NL0 473 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ASAH2Q9NR71 780 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 RCOR3Q9P2K3 495 aaPredicted RBP14.51□□□□□ -0.09
SMAD9-204ENST00000483941 DNMT3LQ9UJW3 386 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 TLR6Q9Y2C9 796 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 FRYLO94915 3013 aa14.51□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF840PA6NDX5 716 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 IRAK2O43187 625 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 GALR2O43603 387 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 TLR5O60602 858 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 IGLV3-25P01717 112 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 APOEP02649 317 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 FGGP02679 453 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 RARAP10276 462 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 PYGMP11217 842 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 ZFXP17010 805 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 PTPN2P17706 415 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 KDELR1P24390 212 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 DDX6P26196 483 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 HTR7P34969 479 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 ADRA1BP35368 520 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 ARL4AP40617 200 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 COG7P83436 770 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 SCAPQ12770 1279 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 MTMR3Q13615 1198 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 DPYSL2Q16555 572 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 UNC45BQ8IWX7 931 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 TTC13Q8NBP0 860 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 SLC22A17Q8WUG5 538 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 SUSD6Q92537 303 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 HSPH1Q92598 858 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 MRPS31Q92665 395 aaKnown RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 HAPLN3Q96S86 360 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 FRMD8P1Q9BZ68 369 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 OSBPL8Q9BZF1 889 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 NMUR1Q9HB89 426 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 MAN1C1Q9NR34 630 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 DZANK1Q9NVP4 752 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 DONSONQ9NYP3 566 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 MARCH2Q9P0N8 246 aa14.5□□□□□ -0.09
SMAD9-204ENST00000483941 FEZ2Q9UHY8 353 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 HBS1LQ9Y450 684 aaKnown RBP14.5□□□□□ -0.09
SMAD9-204ENST00000483941 CLUHO75153 1309 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SYNJ2BP-COX16A0A087WUM0 186 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 PRR23AA6NEV1 266 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 EFCAB8A8MWE9 144 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 KRIT1O00522 736 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF185O15231 689 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF189O75820 626 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 PDGFBP01127 241 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 CDH6P55285 790 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 RING1Q06587 406 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 TRIP4Q15650 581 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 DUSP6Q16828 381 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SH3PXD2AQ5TCZ1 1133 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 NUGGCQ68CJ6 796 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SPOCD1Q6ZMY3 1216 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 TAC4Q86UU9 113 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 FAM131BQ86XD5 332 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 SLC13A5Q86YT5 568 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 CASP10Q92851 521 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF670Q9BS34 389 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 CARD6Q9BX69 1037 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.49□□□□□ -0.09
SMAD9-204ENST00000483941 COX16Q9P0S2 106 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 STIM2Q9P246 746 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 FZD10Q9ULW2 581 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 AP4E1Q9UPM8 1137 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 PATJQ8NI35 1801 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 GVINP1Q7Z2Y8 2422 aa14.49□□□□□ -0.09
SMAD9-204ENST00000483941 DNAH14Q0VDD8 3507 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF292O60281 2723 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 H3BRJ5 948 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF197O14709 1029 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 RIOK3O14730 519 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 IL1R2P27930 398 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms