RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 IQUBQ8NA54 791 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 CYB5D2Q8WUJ1 264 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 DUSP16Q9BY84 665 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 OSGEPQ9NPF4 335 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
UBR4-213ENST00000483922 RASAL2Q9UJF2 1139 aa13.51□□□□□ -0.25
UBR4-213ENST00000483922 GOLGA4Q13439 2230 aaKnown RBP13.51□□□□□ -0.25
UBR4-213ENST00000483922 CYSRT1A8MQ03 144 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 C10orf142B7Z368 130 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 WNT9AO14904 365 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 WNT1P04628 370 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 RPN1P04843 607 aaKnown RBP13.5□□□□□ -0.25
UBR4-213ENST00000483922 IGHV4-34P06331 123 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 ACADMP11310 421 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PDCP20941 246 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 HOXD9P28356 352 aaPredicted RBP13.5□□□□□ -0.25
UBR4-213ENST00000483922 CHKAP35790 457 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 SGSHP51688 502 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 COG7P83436 770 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 STK38Q15208 465 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 CCDC157Q569K6 752 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 KIAA0907Q7Z7F0 614 aaPredicted RBP13.5□□□□□ -0.25
UBR4-213ENST00000483922 ADIPOR2Q86V24 386 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 GALNT15Q8N3T1 639 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 CPXM2Q8N436 756 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
UBR4-213ENST00000483922 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 TAF4BQ92750 862 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 CIPCQ9C0C6 399 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PRORYQ9H606 182 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PRSS16Q9NQE7 514 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 ZNF510Q9Y2H8 683 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 MYH10P35580 1976 aa13.5□□□□□ -0.25
UBR4-213ENST00000483922 PVALEFA0A1B0GWK0 134 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 TULP2O00295 520 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 PAPSS1O43252 624 aaPredicted RBP13.49□□□□□ -0.25
UBR4-213ENST00000483922 AFMP43652 599 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
UBR4-213ENST00000483922 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 SERPINA13PQ6UXR4 307 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 GATAD2AQ86YP4 633 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 WFDC5Q8TCV5 224 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 TAS1R2Q8TE23 839 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 DDI1Q8WTU0 396 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 SNX19Q92543 992 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 NT5C1AQ9BXI3 368 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 SLC2A11Q9BYW1 496 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 DCLK3Q9C098 648 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 PCED1AQ9H1Q7 454 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
UBR4-213ENST00000483922 SLC12A8A0AV02 714 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 TIMM44O43615 452 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 CUTAO60888 179 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 CLSTN1O94985 981 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 FSBPO95073 299 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 SEMA4FO95754 770 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 RALAP11233 206 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 CD58P19256 250 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
UBR4-213ENST00000483922 GRIA4P48058 902 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 PSEN1P49768 467 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 DNAJC3Q13217 504 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 EIF4HQ15056 248 aaKnown RBP13.48□□□□□ -0.25
UBR4-213ENST00000483922 TRIP4Q15650 581 aaPredicted RBP13.48□□□□□ -0.25
UBR4-213ENST00000483922 ZNF394Q53GI3 561 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 MYO19Q96H55 970 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 LMLNQ96KR4 655 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 ARID3AQ99856 593 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
UBR4-213ENST00000483922 MARCH2Q9P0N8 246 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 SERGEFQ9UGK8 458 aa13.48□□□□□ -0.25
UBR4-213ENST00000483922 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 IKBKBO14920 756 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 STX6O43752 255 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 KIF20AO95235 890 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 NR3C1P04150 777 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 P4HA1P13674 534 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 CD27P26842 260 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 GRK6P43250 576 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 GCLMP48507 274 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 YWHAGP61981 247 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBR4-213ENST00000483922 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SLC39A7Q92504 469 aa13.47□□□□□ -0.25
UBR4-213ENST00000483922 SEMA4DQ92854 862 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms