RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 FBXW11Q9UKB1 542 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 ATP11BQ9Y2G3 1177 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 ALPK3Q96L96 1907 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 VWA8A3KMH1 1905 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 CLUHO75153 1309 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 BCLAF3A2AJT9 711 aaKnown RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 ALOX15BO15296 676 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 SOAT2O75908 522 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 METTL18O95568 372 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 VAV1P15498 845 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 GCAP28676 217 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 SLC11A1P49279 550 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 GPX6P59796 221 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 GNGT1P63211 74 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 TLE2Q04725 743 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 SEMA3BQ13214 749 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 EIF4EBP2Q13542 120 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 DPYSQ14117 519 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 HIF1AQ16665 826 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 RFX8Q6ZV50 586 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 TAS1R1Q7RTX1 841 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 SCD5Q86SK9 330 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 TAC4Q86UU9 113 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 HOOK3Q86VS8 718 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 SPATA2LQ8IUW3 424 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 ABI1Q8IZP0 508 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 BCL7CQ8WUZ0 217 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 PGAP3Q96FM1 320 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 FAM193BQ96PV7 902 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 HIPK3Q9H422 1215 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 ELAC1Q9H777 363 aaKnown RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 NMUR1Q9HB89 426 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 XPO7Q9UIA9 1087 aaKnown RBP9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 ADAM28Q9UKQ2 775 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 PTPRDP23468 1912 aa9.15□□□□□ -0.95
CDC42SE1-204ENST00000483763 RGS16O15492 202 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SSTR1P30872 391 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARL4AP40617 200 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 USP46P62068 366 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MRPL58Q14197 206 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 KCNJ11Q14654 390 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MAPRE1Q15691 268 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 PSTKQ8IV42 348 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SCN4BQ8IWT1 228 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 DQX1Q8TE96 717 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SEPT8Q92599 483 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 TKTL2Q9H0I9 626 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 YY1AP1Q9H869 796 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 TBK1Q9UHD2 729 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SFMBT1Q9UHJ3 866 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MRPL42Q9Y6G3 142 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 F5H423 210 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MSI1O43347 362 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 DGKIO75912 1065 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 VNN2O95498 520 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 ACTN2P35609 894 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MDH1P40925 334 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 NR2C2P49116 596 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 CXCR3P49682 368 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 PPP2R2AP63151 447 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 RTP2Q5QGT7 225 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARTNQ5T4W7 220 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 MFSD5Q6N075 450 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 ANKRD33Q7Z3H0 272 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 TMCO2Q7Z6W1 182 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 PCGF5Q86SE9 256 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 EXOC3L1Q86VI1 746 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 NPWQ8N729 165 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SLC9A7Q96T83 725 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 CEP41Q9BYV8 373 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 FOXP3Q9BZS1 431 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 WDCPQ9H6R7 721 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 PNPLA8Q9NP80 782 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 EURLQ9NYK6 297 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 SLC27A5Q9Y2P5 690 aa9.14□□□□□ -0.95
CDC42SE1-204ENST00000483763 BPTFQ12830 3046 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 E7ESA3 106 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 DCLK1O15075 740 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 EIF3HO15372 352 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 UPP2O95045 317 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 IGLV3-25P01717 112 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ALDH2P05091 517 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 APRTP07741 180 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 GALTP07902 379 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 COL6A1P12109 1028 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ERCC2P18074 760 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 PAX3P23760 479 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 LSP1P33241 339 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 GRIA1P42261 906 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms