RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 MBLAC1A4D2B0 266 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 B4E1Z4 1266 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 LEFTY2O00292 366 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 MTSS1O43312 755 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TBC1D4O60343 1298 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 N4BP1O75113 896 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 IPO13O94829 963 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 PCDH8O95206 1070 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 NCLP19338 710 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CD72P21854 359 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 KLRC2P26717 231 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CCND2P30279 289 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 APOBEC3AP31941 199 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TCF7P36402 384 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ALDH7A1P49419 539 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CLK3P49761 638 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 HSD17B4P51659 736 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 GPC5P78333 572 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 UBXN2BQ14CS0 331 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 QRICH1Q2TAL8 776 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ZNF528Q3MIS6 628 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 DCAF17Q5H9S7 520 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 LY6G5CQ5SRR4 150 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ZBTB41Q5SVQ8 909 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 GPATCH4Q5T3I0 446 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 IL31Q6EBC2 164 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 METTL7BQ6UX53 244 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 STOX1Q6ZVD7 989 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 XYLT1Q86Y38 959 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 PHYKPLQ8IUZ5 450 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 FTSJ3Q8IY81 847 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 NXPE1Q8N323 547 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 LILRA3Q8N6C8 439 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 RNF169Q8NCN4 708 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 PJA1Q8NG27 643 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 OR52N2Q8NGI0 321 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 SLC22A17Q8WUG5 538 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TRAPPC12Q8WVT3 735 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 SEPT1Q8WYJ6 367 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 GLG1Q92896 1179 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TTC14Q96N46 770 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CASD1Q96PB1 797 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 BBC3Q96PG8 261 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CPPED1Q9BRF8 314 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 FDXACB1Q9BRP7 624 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 MAF1Q9H063 256 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TMEM117Q9H0C3 514 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 MS4A5Q9H3V2 200 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ARHGEF3Q9NR81 526 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 RGS18Q9NS28 235 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 SEMA4GQ9NTN9 838 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ANKFY1Q9P2R3 1169 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 FBXO4Q9UKT5 387 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 RAB23Q9ULC3 237 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ST3GAL5Q9UNP4 418 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 NOC2LQ9Y3T9 749 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 PCDHGA2Q9Y5H1 932 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 TRPV2Q9Y5S1 764 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 ANKRD11Q6UB99 2663 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 GREB1LQ9C091 1923 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 CACNA1IQ9P0X4 2223 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 CCDC171Q6TFL3 1326 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 IGSF9BQ9UPX0 1349 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 CCDC195A0A1B0GUA6 201 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 GSTTP1A0A1W2PQM5 241 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 KANSL1LA0AUZ9 987 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 RRN3P2A6NIE6 340 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 GCOM1H8Y6P7 765 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 TGM5O43548 720 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ORC4O43929 436 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 RPS6KA5O75582 802 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ALDH1A2O94788 518 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 LY86O95711 162 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ZFYP08048 801 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 POLR2MP0CAP2 368 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SNHG28P0DPA3 235 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 FBLP22087 321 aaKnown RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 HSD3B2P26439 372 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 PPM1AP35813 382 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 STARD6P59095 220 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 MRPS9P82933 396 aaKnown RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SHC2P98077 582 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ADCY1Q08828 1119 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 PTPAQ15257 358 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SLC44A4Q53GD3 710 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 HECTD2Q5U5R9 776 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 TSHZ3Q63HK5 1081 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 EGFLAMQ63HQ2 1017 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 OLFML1Q6UWY5 402 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SYT12Q8IV01 421 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SLC39A11Q8N1S5 342 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 NME8Q8N427 588 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ZBTB44Q8NCP5 570 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 MYADMQ96S97 322 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 RPP25Q9BUL9 199 aaKnown RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 EPC1Q9H2F5 836 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SMARCAD1Q9H4L7 1026 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms