RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PPP1R26Q5T8A7 1209 aaPredicted RBP13.43□□□□□ -0.26
TMEM54-206ENST00000482771 GRAMD1CQ8IYS0 662 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
TMEM54-206ENST00000482771 OR2T3Q8NH03 318 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
TMEM54-206ENST00000482771 SLC2A11Q9BYW1 496 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 PCED1AQ9H1Q7 454 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 LHX5Q9H2C1 402 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 MAGEF1Q9HAY2 307 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 CYP3A43Q9HB55 503 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 MARCH2Q9P0N8 246 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 PLA2G4CQ9UP65 541 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 BPTFQ12830 3046 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 TSPAN3O60637 253 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 FSBPO95073 299 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 NR3C1P04150 777 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 INCA1Q0VD86 236 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 CAMK2GQ13555 558 aaPredicted RBP13.42□□□□□ -0.26
TMEM54-206ENST00000482771 SMAD1Q15797 465 aaKnown RBP13.42□□□□□ -0.26
TMEM54-206ENST00000482771 KCNT1Q5JUK3 1230 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
TMEM54-206ENST00000482771 CPXM2Q8N436 756 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 ZNF366Q8N895 744 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 CYB5D2Q8WUJ1 264 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 APOBEC3GQ9HC16 384 aaKnown RBP13.42□□□□□ -0.26
TMEM54-206ENST00000482771 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
TMEM54-206ENST00000482771 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.42□□□□□ -0.26
TMEM54-206ENST00000482771 A0A087WV48 116 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 H0Y8X5 98 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 PDXKO00764 312 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 SEMA4FO95754 770 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 PDIA4P13667 645 aaKnown RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 GRK6P43250 576 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 GCLMP48507 274 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 VAMP7P51809 220 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 PTPRNQ16849 979 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FNDC3BQ53EP0 1204 aaKnown RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 MPPE1Q53F39 396 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 ZNF394Q53GI3 561 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 DHRS13Q6UX07 377 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 LAYNQ6UX15 382 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 SCUBE3Q8IX30 993 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 ARHGAP18Q8N392 663 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 NDRG1Q92597 394 aaKnown RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 IGSF8Q969P0 613 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 BIRC7Q96CA5 298 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
TMEM54-206ENST00000482771 ARID3AQ99856 593 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 BTBD1Q9H0C5 482 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 KCTD10Q9H3F6 313 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 OSGEPQ9NPF4 335 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FAM13BQ9NYF5 915 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 FRMD4BQ9Y2L6 1034 aa13.41□□□□□ -0.26
TMEM54-206ENST00000482771 KLRC4O43908 158 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 PCDHGA12O60330 932 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 YEATS4O95619 227 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 CD27P26842 260 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 GRIA4P48058 902 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 YWHAGP61981 247 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMEM54-206ENST00000482771 RPS14P62263 151 aaKnown RBP13.4□□□□□ -0.26
TMEM54-206ENST00000482771 IL9RQ01113 521 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
TMEM54-206ENST00000482771 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 IMPG2Q9BZV3 1241 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 TMEM245Q9H330 911 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 PRSS16Q9NQE7 514 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 SERTAD1Q9UHV2 236 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
TMEM54-206ENST00000482771 PLK4O00444 970 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 DNTTP04053 509 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 JUPP14923 745 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 HOXD9P28356 352 aaPredicted RBP13.39□□□□□ -0.27
TMEM54-206ENST00000482771 HLA-FP30511 346 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 CTSKP43235 329 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 ME1P48163 572 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 HARS2P49590 506 aaKnown RBP13.39□□□□□ -0.27
TMEM54-206ENST00000482771 CCT8P50990 548 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 BCAT1P54687 386 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
TMEM54-206ENST00000482771 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 ADAT2Q7Z6V5 191 aaKnown RBP13.39□□□□□ -0.27
TMEM54-206ENST00000482771 ADIPOR2Q86V24 386 aa13.39□□□□□ -0.27
TMEM54-206ENST00000482771 PIGZQ86VD9 579 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms