RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 DLG4P78352 724 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 PDE4CQ08493 712 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 EFEMP1Q12805 493 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 CCDC157Q569K6 752 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 SHC4Q6S5L8 630 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 Q6ZNB5 142 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 ANKS1BQ7Z6G8 1248 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 PDZD3Q86UT5 571 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 UNC93AQ86WB7 457 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 CEP57L1Q8IYX8 460 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 IL21RQ9HBE5 538 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 CSNK1G1Q9HCP0 422 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 FAM13BQ9NYF5 915 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 WSB2Q9NYS7 404 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 EIF2B4Q9UI10 523 aaKnown RBP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 PCOLCE2Q9UKZ9 415 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 FNDC3AQ9Y2H6 1198 aaKnown RBP10.83□□□□□ -0.68
DDX39B-220ENST00000482195 ZNF510Q9Y2H8 683 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
DDX39B-220ENST00000482195 SMG1Q96Q15 3661 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 FAM221BA6H8Z2 402 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 EIF4E1BA6NMX2 242 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 KCNJ18B7U540 433 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 CILPO75339 1184 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 YEATS4O95619 227 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 EPHX1P07099 455 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 OXTRP30559 389 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 ME1P48163 572 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 TPMTP51580 245 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 MFAP3P55082 362 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 EHHADHQ08426 723 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 ZNF234Q14588 700 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 GEN1Q17RS7 908 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 ZACNQ401N2 412 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 IL27RAQ6UWB1 636 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 SERPINA13PQ6UXR4 307 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 CCNI2Q6ZMN8 369 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 RSRC2Q7L4I2 434 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 TMPRSS6Q8IU80 811 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 CRYBG2Q8N1P7 616 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 HNRNPLLQ8WVV9 542 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 TAF4BQ92750 862 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 TWNKQ96RR1 684 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 CDK5RAP1Q96SZ6 601 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 NT5C1AQ9BXI3 368 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 MKRN2Q9H000 416 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 TM7SF3Q9NS93 570 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 THAP10Q9P2Z0 257 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 FRMD4BQ9Y2L6 1034 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 RAXQ9Y2V3 346 aa10.82□□□□□ -0.68
DDX39B-220ENST00000482195 URB1O60287 2271 aaKnown RBP10.82□□□□□ -0.68
DDX39B-220ENST00000482195 PLXNA2O75051 1894 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 NYNRINQ9P2P1 1898 aaKnown RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 A0A1B0GVT2 93 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 PVALEFA0A1B0GWK0 134 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 HHLA1C9JL84 531 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 NPC1O15118 1278 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 NR3C1P04150 777 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 PRKCHP24723 683 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 CHKAP35790 457 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 HLA-BQ31612 363 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 FNDC3BQ53EP0 1204 aaKnown RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 ZNF394Q53GI3 561 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 FYB2Q5VWT5 728 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 SV2AQ7L0J3 742 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 CCDC186Q7Z3E2 898 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 SLCO6A1Q86UG4 719 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 DENND1CQ8IV53 801 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 KIAA0895Q8NCT3 520 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 CCDC150Q8NCX0 1101 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 CADM4Q8NFZ8 388 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 DDI1Q8WTU0 396 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 SORCS1Q8WY21 1168 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 INTS4Q96HW7 963 aaKnown RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 HNRNPABQ99729 332 aaKnown RBP10.81□□□□□ -0.68
DDX39B-220ENST00000482195 DCLK3Q9C098 648 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 STRIP2Q9ULQ0 834 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 SLC27A6Q9Y2P4 619 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 IGSF10Q6WRI0 2623 aa10.81□□□□□ -0.68
DDX39B-220ENST00000482195 LOC400499M0QZD8 3231 aa10.8□□□□□ -0.68
DDX39B-220ENST00000482195 SLC12A8A0AV02 714 aa10.8□□□□□ -0.68
DDX39B-220ENST00000482195 FLRT2O43155 660 aa10.8□□□□□ -0.68
DDX39B-220ENST00000482195 DXOO77932 396 aaKnown RBP10.8□□□□□ -0.68
DDX39B-220ENST00000482195 PENKP01210 267 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-220ENST00000482195 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
DDX39B-220ENST00000482195 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms