RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RPAP2Q8IXW5 612 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 TDRD5Q8NAT2 981 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 PIWIL2Q8TC59 973 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 LIN37Q96GY3 246 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 TMX3Q96JJ7 454 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MAML3Q96JK9 1138 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PPP1R9BQ96SB3 815 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ZNF341Q9BYN7 854 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FTOQ9C0B1 505 aaKnown RBP eCLIP3.57□□□□□ -1.84
SMC6-208ENST00000481708 EIF2B3Q9NR50 452 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 TPSG1Q9NRR2 321 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 COMMD8Q9NX08 183 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SH3BP4Q9P0V3 963 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 POGKQ9P215 609 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 COL27A1Q8IZC6 1860 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 MYBBP1AQ9BQG0 1328 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 PRAMEF22A3QJZ6 481 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 LDLRAD4O15165 306 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 KLK10O43240 276 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SPRY1O43609 319 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 TAF5LO75529 589 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FUCA1P04066 466 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 GUCY1A2P33402 732 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SREBF1P36956 1147 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 RABIFP47224 123 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MRPS5P82675 430 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 INSM1Q01101 510 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 MTM1Q13496 603 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 GAB4Q2WGN9 574 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 KRBOX4Q5JUW0 171 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 GARNL3Q5VVW2 1013 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PRAMEF18Q5VWM3 479 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 BTBD8Q5XKL5 378 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 TBC1D21Q8IYX1 336 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 N4BP2L2Q92802 583 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 SHISA4Q96DD7 197 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 CEP95Q96GE4 821 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 UROC1Q96N76 676 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 NOX5Q96PH1 765 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MYOCQ99972 504 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FUZQ9BT04 418 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 CDADC1Q9BWV3 514 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PLEKHA2Q9HB19 425 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FANCFQ9NPI8 374 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 TDP1Q9NUW8 608 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ADGRE2Q9UHX3 823 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PLA2G2DQ9UNK4 145 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 A0A087WWL8 130 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PROCP04070 461 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 NTRK1P04629 796 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 DLDP09622 509 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 SELLP14151 372 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 GCH1P30793 250 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 DEKP35659 375 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 NNMTP40261 264 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 INHBEP58166 350 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PSMC1P62191 440 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 SPIRE1Q08AE8 756 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 ERMARDQ5T6L9 678 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 OLFML2BQ68BL8 750 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 C17orf53Q8N3J3 647 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 TMEM57Q8N5G2 664 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PGAP3Q96FM1 320 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 HSPA12BQ96MM6 686 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PIP5K1AQ99755 562 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 HGH1Q9BTY7 390 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 WNT8AQ9H1J5 351 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 EPB41L1Q9H4G0 881 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 RXFP1Q9HBX9 757 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SLC23A1Q9UHI7 598 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SLCO3A1Q9UIG8 710 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 TMEM265A0A087WTH1 108 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 ZSCAN5CA6NGD5 496 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 E7EVH7 732 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 H7C4K7 107 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 THAP12O43422 761 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 HEXIM1O94992 359 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 CYP2A6P11509 494 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 ABCD1P33897 745 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SLC11A2P49281 568 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 FAM3BP58499 235 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 ARHGAP8P85298 464 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 CAP1Q01518 475 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 AIMP1Q12904 312 aaKnown RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 COASYQ13057 564 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 NPY5RQ15761 445 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 EMC4Q5J8M3 183 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 TTC38Q5R3I4 469 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 RNF43Q68DV7 783 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 RASAL3Q86YV0 1011 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 TOR1AIP2Q8NFQ8 470 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 OR6Y1Q8NGX8 325 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 MAGEB5Q9BZ81 275 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 GLIS2Q9BZE0 524 aaPredicted RBP3.56□□□□□ -1.84
SMC6-208ENST00000481708 LAMP5Q9UJQ1 280 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 PCDHB6Q9Y5E3 794 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 A0A0U1RQK1 487 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 ZNF320A2RRD8 509 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 WIPF3A6NGB9 483 aa3.56□□□□□ -1.84
SMC6-208ENST00000481708 SCG2P13521 617 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms