RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ACADMP11310 421 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 GABRG2P18507 467 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
CCM2-213ENST00000480658 GPD2P43304 727 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 ATXN3P54252 364 aaPredicted RBP11.92□□□□□ -0.5
CCM2-213ENST00000480658 OXCT1P55809 520 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 TBX4P57082 545 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 ENPP2Q13822 863 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 MAP7D1Q3KQU3 841 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 WDR45BQ5MNZ6 344 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 STPG1Q5TH74 334 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 PEAR1Q5VY43 1037 aaPredicted RBP11.92□□□□□ -0.5
CCM2-213ENST00000480658 SERPINA13PQ6UXR4 307 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 BHLHA9Q7RTU4 235 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 CREBRFQ8IUR6 639 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCM2-213ENST00000480658 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 EDEM1Q92611 657 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 BHMTQ93088 406 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 WBP2Q969T9 261 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 FAM149B1Q96BN6 582 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 PIWIL1Q96J94 861 aaKnown RBP11.92□□□□□ -0.5
CCM2-213ENST00000480658 CIPCQ9C0C6 399 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 TMEM9BQ9NQ34 198 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 ASNSD1Q9NWL6 643 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 SCML1Q9UN30 329 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 STON1Q9Y6Q2 735 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 DMXL1Q9Y485 3027 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 LNP1A1A4G5 178 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 TULP2O00295 520 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 DCLK1O15075 740 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 HSF2BPO75031 334 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 LETM1O95202 739 aaPredicted RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 ASLP04424 464 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 SYPP08247 313 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 ADRB1P08588 477 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 NDUFV2P19404 249 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 EEF1GP26641 437 aaKnown RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 HOXD9P28356 352 aaPredicted RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 YWHAZP63104 245 aaKnown RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 MESP2Q0VG99 397 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 SF3A2Q15428 464 aaKnown RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 DUOXA1Q1HG43 343 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 PPM1JQ5JR12 505 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 EFHC1Q5JVL4 640 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 EMC10Q5UCC4 262 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 SLC23A3Q6PIS1 610 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 ARHGEF19Q8IW93 802 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 KDM1BQ8NB78 822 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 ANKRD20A12PQ8NF67 263 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 ZNF606Q8WXB4 792 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 SHC3Q92529 594 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 PRCCQ92733 491 aaPredicted RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 BTN2A3PQ96KV6 586 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 MRGPRX1Q96LB2 322 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 KREMEN1Q96MU8 473 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 PRDM16Q9HAZ2 1276 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 SFMBT1Q9UHJ3 866 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 GGA2Q9UJY4 613 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 TPX2Q9ULW0 747 aaKnown RBP11.91□□□□□ -0.5
CCM2-213ENST00000480658 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
CCM2-213ENST00000480658 ACSL4O60488 711 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 POLR2EP19388 210 aaKnown RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 ABCB4P21439 1286 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 CD6P30203 668 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 KRT9P35527 623 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 RGS7P49802 495 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 ST8SIA6P61647 398 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 PDCLQ13371 301 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 CDH18Q13634 790 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 HNRNPDQ14103 355 aaKnown RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 TTC31Q49AM3 519 aaPredicted RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 TRIM61Q5EBN2 209 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 MFN1Q8IWA4 741 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SFTPA1Q8IWL2 248 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 C1orf131Q8NDD1 294 aaKnown RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 PIGKQ92643 395 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SIPA1Q96FS4 1042 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 LSM14BQ9BX40 385 aaKnown RBP11.9□□□□□ -0.5
CCM2-213ENST00000480658 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 ZDHHC5Q9C0B5 715 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 NDST4Q9H3R1 872 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SLC32A1Q9H598 525 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SYNCQ9H7C4 482 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.57e-6■□□□□ 10.1
CCM2-213ENST00000480658 CACNA2D2Q9NY47 1150 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 SUN2Q9UH99 717 aa11.9□□□□□ -0.5
CCM2-213ENST00000480658 PILRBQ9UKJ0 227 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms