RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PM20D1Q6GTS8 502 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 WDR59Q6PJI9 974 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 TRIM72Q6ZMU5 477 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 FAM183BPQ6ZVS7 135 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 BHLHA9Q7RTU4 235 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 TMEM110Q86TL2 294 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 OLIG1Q8TAK6 271 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 IPO4Q8TEX9 1081 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 LOXL4Q96JB6 756 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 DNAJC7Q99615 494 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CHP1Q99653 195 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 C11orf70Q9BRQ4 267 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 SYT11Q9BT88 431 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 NACA2Q9H009 215 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 RNF38Q9H0F5 515 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CNGB3Q9NQW8 809 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 THG1LQ9NWX6 298 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 SMPD4Q9NXE4 827 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 ARHGAP20Q9P2F6 1191 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 SOBPA7XYQ1 873 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 COCHO43405 550 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 TLR5O60602 858 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 FBXO21O94952 628 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 LTFP02788 710 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 ZDHHC11BP0C7U3 371 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 MBL2P11226 248 aaPredicted RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 RALAP11233 206 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 UNGP13051 313 aaPredicted RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 DDX6P26196 483 aaKnown RBP eCLIP9.46□□□□□ -0.9
VCP-206ENST00000480327 CDC25BP30305 580 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 AVPR1AP37288 418 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 MPLP40238 635 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 PPP3CCP48454 512 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 RPL34P49207 117 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 MESP2Q0VG99 397 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 GRSF1Q12849 480 aaKnown RBP eCLIP9.46□□□□□ -0.9
VCP-206ENST00000480327 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 MTF1Q14872 753 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 EML3Q32P44 896 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 AASDHQ4L235 1098 aaPredicted RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 C10orf120Q5SQS8 335 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 BSPRYQ5W0U4 402 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 ACAD10Q6JQN1 1059 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 RSRC2Q7L4I2 434 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 ARHGAP18Q8N392 663 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 TC2NQ8N9U0 490 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 RPLP0P6Q8NHW5 317 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 GOLGA1Q92805 767 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 C18orf8Q96DM3 657 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 LINC00597Q9H2U6 94 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 ECT2Q9H8V3 914 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
VCP-206ENST00000480327 ADAM22Q9P0K1 906 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 ADAMTS1Q9UHI8 967 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 RALYQ9UKM9 306 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 SLC8A2Q9UPR5 921 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 BZW2Q9Y6E2 419 aaKnown RBP9.46□□□□□ -0.9
VCP-206ENST00000480327 WNT6Q9Y6F9 365 aa9.46□□□□□ -0.9
VCP-206ENST00000480327 PCDH15Q96QU1 1955 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 A0A087X0T9 212 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 PCNX2A6NKB5 2137 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 CAPN9O14815 690 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 GIPC1O14908 333 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 FOXD2O60548 495 aaPredicted RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 KCNK5O95279 499 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 GJB6O95452 261 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 OAS1P00973 400 aaKnown RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 HMBSP08397 361 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 FAM228BP0C875 321 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 IRF1P10914 325 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 NCAM1P13591 858 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 HNRNPLP14866 589 aaKnown RBP eCLIP9.45□□□□□ -0.9
VCP-206ENST00000480327 DRD1P21728 446 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 KCNA4P22459 653 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 MMP8P22894 467 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 OPRD1P41143 372 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 SNX16P57768 344 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 SHC2P98077 582 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 SLC6A3Q01959 620 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 CENPCQ03188 943 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 EFEMP1Q12805 493 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 GSE1Q14687 1217 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 PDGFRLQ15198 375 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
VCP-206ENST00000480327 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 SYT13Q7L8C5 426 aa9.45□□□□□ -0.9
VCP-206ENST00000480327 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms