RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 C1QL3Q5VWW1 255 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
USP11-208ENST00000480104 C14orf80Q86SX3 495 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 GANCQ8TET4 914 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 PCED1BQ96HM7 432 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 PIWIL1Q96J94 861 aaKnown RBP12.54□□□□□ -0.4
USP11-208ENST00000480104 SERGEFQ9UGK8 458 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 CHORDC1Q9UHD1 332 aaPredicted RBP12.54□□□□□ -0.4
USP11-208ENST00000480104 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 COL27A1Q8IZC6 1860 aaPredicted RBP12.54□□□□□ -0.4
USP11-208ENST00000480104 WIPF3A6NGB9 483 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 SEMA7AO75326 666 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 DGKAP23743 735 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 LMO2P25791 158 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 SMTNP53814 917 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 EIF4HQ15056 248 aaKnown RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 E2F5Q15329 346 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 FNDC3BQ53EP0 1204 aaKnown RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 TMEM215Q68D42 235 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 SCARA3Q6AZY7 606 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 RINT1Q6NUQ1 792 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 BORAQ6PGQ7 559 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 BLOC1S2Q6QNY1 142 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 OVCA2Q8WZ82 227 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 APOLD1Q96LR9 279 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 ZNF71Q9NQZ8 489 aaPredicted RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 TUBD1Q9UJT1 453 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
USP11-208ENST00000480104 CDH9Q9ULB4 789 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
USP11-208ENST00000480104 E9PMD0 336 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 DTNBO60941 627 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 ITGB3P05106 788 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 KRT7P08729 469 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 OR52Z1P0C646 297 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 GIMD1P0DJR0 217 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 LIPCP11150 499 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 XBP1P17861 261 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 RPS6KB1P23443 525 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MCM7P33993 719 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 KRT2P35908 639 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 ARID5AQ03989 594 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
USP11-208ENST00000480104 SOWAHAQ2M3V2 549 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MDH1BQ5I0G3 518 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 FYB2Q5VWT5 728 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.41
USP11-208ENST00000480104 CAPRIN2Q6IMN6 1127 aaKnown RBP12.52□□□□□ -0.41
USP11-208ENST00000480104 SLC39A4Q6P5W5 647 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 TOP6BLQ8N6T0 577 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MFSD2AQ8NA29 543 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MOCOSQ96EN8 888 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
USP11-208ENST00000480104 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.41
USP11-208ENST00000480104 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 FBRSQ9HAH7 460 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 CYLDQ9NQC7 956 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 PRSS16Q9NQE7 514 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 FBXL12Q9NXK8 326 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 GDAP2Q9NXN4 497 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 NCKAP1Q9Y2A7 1128 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 TACC2O95359 2948 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 MYH10P35580 1976 aa12.52□□□□□ -0.41
USP11-208ENST00000480104 HIVEP3Q5T1R4 2406 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 LRRC72A6NJI9 287 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 C10orf142B7Z368 130 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 TLR5O60602 858 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CLDN1O95832 211 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 TBX18O95935 607 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 PIGRP01833 764 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 PDGFRBP09619 1106 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 PLCG1P19174 1290 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 GNLYP22749 145 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 PGFP49763 221 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CCR5P51681 352 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
USP11-208ENST00000480104 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 OR2T34Q8NGX1 318 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 SCAMP5Q8TAC9 235 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CYB5D2Q8WUJ1 264 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 FAM84AQ96KN4 292 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 ACSL6Q9UKU0 697 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 CLEC4EQ9ULY5 219 aa12.51□□□□□ -0.41
USP11-208ENST00000480104 A0A087X0B3 334 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms