RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RHOT1Q8IXI2 618 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 FAM217AQ8IXS0 508 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 C17orf53Q8N3J3 647 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 CCDC185Q8N715 623 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 HES6Q96HZ4 224 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 BTN2A3PQ96KV6 586 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 WDCPQ9H6R7 721 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 AMFRQ9UKV5 643 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 FZD10Q9ULW2 581 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 FAM50BQ9Y247 325 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 ZNF510Q9Y2H8 683 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 EYSQ5T1H1 3165 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 SYNJ2BP-COX16A0A087WUM0 186 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 I6L893 689 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 FTCDO95954 541 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 TUBB4AP04350 444 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ADRA1BP35368 520 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 HARS2P49590 506 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 KCNQ1P51787 676 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 DPYSL2Q16555 572 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 FAM78AQ5JUQ0 283 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ERMARDQ5T6L9 678 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 SLC35F6Q8N357 371 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 PHF7Q9BWX1 381 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 TKTL2Q9H0I9 626 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 OSBPL2Q9H1P3 480 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ANLNQ9NQW6 1124 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 GKN1Q9NS71 199 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 COX16Q9P0S2 106 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 AP4E1Q9UPM8 1137 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 COL4A3Q01955 1670 aa13.01□□□□□ -0.33
TRAPPC12-218ENST00000479897 ZNF487B1APH4 448 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 ACSL4O60488 711 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 PAGE1O75459 146 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 ECI2O75521 394 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 KLKB1P03952 638 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 HMBSP08397 361 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 RARAP10276 462 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 CORO1AP31146 461 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 GBP2P32456 591 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 HTR7P34969 479 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 ETF1P62495 437 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 EFHC2Q5JST6 749 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 MANEALQ5VSG8 457 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 MTSS1LQ765P7 747 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 RIN3Q8TB24 985 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 RNF34Q969K3 372 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 WBP2Q969T9 261 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 ACSF2Q96CM8 615 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 OTUB2Q96DC9 234 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 C1orf74Q96LT6 269 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 PRMT1Q99873 361 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 SMG9Q9H0W8 520 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 PCSK1NQ9UHG2 260 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 AGO1Q9UL18 857 aaKnown RBP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
TRAPPC12-218ENST00000479897 SH3BP1Q9Y3L3 701 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 NR2E1Q9Y466 385 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 HYOU1Q9Y4L1 999 aa13□□□□□ -0.33
TRAPPC12-218ENST00000479897 COL4A2P08572 1712 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 XIRP2A4UGR9 3374 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 ANHXE9PGG2 379 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 GFRA2O00451 464 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 DDX3YO15523 660 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 IRF1P10914 325 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 HOXC13P31276 330 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 SLC11A2P49281 568 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 PEX5P50542 639 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 ARSEP51690 589 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 GNG11P61952 73 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 FCHO2Q0JRZ9 810 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 PDK2Q15119 407 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 C5orf22Q49AR2 442 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 FAM133BQ5BKY9 247 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 MS4A13Q5J8X5 152 aa12.99□□□□□ -0.33
TRAPPC12-218ENST00000479897 PIK3R6Q5UE93 754 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms