RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 SLC9A4Q6AI14 798 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 TMEM150AQ86TG1 271 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 RBM23Q86U06 439 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 PLD5Q8N7P1 536 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 ACTL9Q8TC94 416 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 FCRL2Q96LA5 508 aaPredicted RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 EPB41L5Q9HCM4 733 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 UXTQ9UBK9 157 aaPredicted RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 OR12D3Q9UGF7 316 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 XPO7Q9UIA9 1087 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 ASB3Q9Y575 518 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 C2orf78A6NCI8 922 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 KCNU1A8MYU2 1149 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 H3BRJ5 948 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 APOC4-APOC2K7ER74 178 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 EEF2KO00418 725 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 APOL1O14791 398 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 CCL16O15467 120 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 DAPK3O43293 454 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 COCHO43405 550 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 APOC2P02655 101 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 EPCAMP16422 314 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 FNTAP49354 379 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 VSNL1P62760 191 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 BYSLQ13895 437 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 DHX34Q14147 1143 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 TRADDQ15628 312 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 TRIP4Q15650 581 aaPredicted RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 RAB30Q15771 203 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 PPM1LQ5SGD2 360 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 PDE12Q6L8Q7 609 aaKnown RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 ZNF276Q8N554 614 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 ATL2Q8NHH9 583 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 P3H4Q92791 437 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 CCDC114Q96M63 670 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 HAPLN3Q96S86 360 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 NACA2Q9H009 215 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 RNF38Q9H0F5 515 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 OSBPL2Q9H1P3 480 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 C10orf88Q9H8K7 445 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 SLC28A3Q9HAS3 691 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 ETNK2Q9NVF9 386 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 STIM2Q9P246 746 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 RCOR3Q9P2K3 495 aaPredicted RBP11.61□□□□□ -0.55
APTX-223ENST00000479656 DNMT3LQ9UJW3 386 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
APTX-223ENST00000479656 ESYT3A0FGR9 886 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 RFPL2O75678 378 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 MAP3K6O95382 1288 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 SRGAP2BP0DMP2 458 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 SLC2A3P11169 496 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 PPP3CCP48454 512 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 PABPC1LQ4VXU2 614 aaKnown RBP11.6□□□□□ -0.55
APTX-223ENST00000479656 WDR93Q6P2C0 686 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 ADGRD2Q7Z7M1 963 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 TADA2BQ86TJ2 420 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 JAMLQ86YT9 394 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 SLC35B2Q8TB61 432 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 RUNDC3BQ96NL0 473 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 CYP2S1Q96SQ9 504 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 CDK5RAP1Q96SZ6 601 aaKnown RBP11.6□□□□□ -0.55
APTX-223ENST00000479656 LRRC3Q9BY71 257 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 MAN1C1Q9NR34 630 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 ARHGEF4Q9NR80 690 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 ZNF148Q9UQR1 794 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 MFHAS1Q9Y4C4 1052 aa11.6□□□□□ -0.55
APTX-223ENST00000479656 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 EPOPA6NHQ4 379 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 RFXAPO00287 272 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 LRIG2O94898 1065 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 ECEL1O95672 775 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 ZFXP17010 805 aaPredicted RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 ERCC2P18074 760 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 TGM2P21980 687 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 GABRR2P28476 465 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 BMP8BP34820 402 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 HCAR3P49019 387 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 KCNQ1P51787 676 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 MLLT6P55198 1093 aaPredicted RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 TPI1P60174 286 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 EIF3EP60228 445 aaKnown RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 SLC10A2Q12908 348 aaPredicted RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 NNTQ13423 1086 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 GAREM2Q75VX8 874 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
APTX-223ENST00000479656 TMC8Q8IU68 726 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 ELMOD1Q8N336 334 aa11.59□□□□□ -0.55
APTX-223ENST00000479656 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms