RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PCDH18Q9HCL0 1135 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
CHD3-210ENST00000479080 MRPS23Q9Y3D9 190 aaKnown RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 HBS1LQ9Y450 684 aaKnown RBP13.61□□□□□ -0.23
CHD3-210ENST00000479080 TRAV19A0A0A6YYK7 116 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 MIF4GDA9UHW6 222 aaKnown RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 GFRA2O00451 464 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 SCAMP3O14828 347 aaKnown RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 ZNF185O15231 689 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 PRPSAP2O60256 369 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 SRGAP2O75044 1071 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 F9P00740 461 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 SRGAP2BP0DMP2 458 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 IRF1P10914 325 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 PYGMP11217 842 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 FSHRP23945 695 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 IL4RP24394 825 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 DDX6P26196 483 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD3-210ENST00000479080 L1CAMP32004 1257 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 CXCR5P32302 372 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 SSR1P43307 286 aaKnown RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 IRAK1P51617 712 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 ITIH3Q06033 890 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 RING1Q06587 406 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 ADCY2Q08462 1091 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 USP4Q13107 963 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 RPS6KA1Q15418 735 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 DPYSL2Q16555 572 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 TAZQ16635 292 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 MANEALQ5VSG8 457 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 C14orf80Q86SX3 495 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 HSPH1Q92598 858 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 FGF13Q92913 245 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 CDK5RAP1Q96SZ6 601 aaKnown RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 PRMT1Q99873 361 aaKnown RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 UBE2ZQ9H832 354 aaPredicted RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 SMARCAL1Q9NZC9 954 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
CHD3-210ENST00000479080 USP15Q9Y4E8 981 aaPredicted RBP13.6□□□□□ -0.23
CHD3-210ENST00000479080 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
CHD3-210ENST00000479080 GOLGA6L7A0A1B0GV03 622 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 LEFTY2O00292 366 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 ZNF197O14709 1029 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 PAGE1O75459 146 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 MOCS2O96007 188 aaPredicted RBP13.59□□□□□ -0.23
CHD3-210ENST00000479080 KRT1P04264 644 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 CKMP06732 381 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 PFKLP17858 780 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 SLC6A4P31645 630 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 CCR1P32246 355 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 GBP1P32455 592 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 DPYSL3Q14195 570 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 ZNF77Q15935 545 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 FAM133BQ5BKY9 247 aaKnown RBP13.59□□□□□ -0.23
CHD3-210ENST00000479080 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 EP400NLQ6ZTU2 488 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 TADA2BQ86TJ2 420 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 ST13P5Q8NFI4 369 aaPredicted RBP13.59□□□□□ -0.23
CHD3-210ENST00000479080 PLD4Q96BZ4 506 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 OSBPL9Q96SU4 736 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHD3-210ENST00000479080 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
CHD3-210ENST00000479080 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 KCNK3O14649 394 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 TCF3P15923 654 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 KDELR1P24390 212 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 WEE1P30291 646 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 CORO1AP31146 461 aaKnown RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 CASQ1P31415 396 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 CDKN2BP42772 138 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 SGSHP51688 502 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 RWDD2BP57060 319 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 LLGL1Q15334 1064 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 HADHQ16836 314 aaKnown RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 ARHGAP15Q53QZ3 475 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 BOLA3Q53S33 107 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 FAM78AQ5JUQ0 283 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 ARID3BQ8IVW6 561 aaPredicted RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 ZSCAN18Q8TBC5 510 aaPredicted RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 SH3RF2Q8TEC5 729 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 FAF2Q96CS3 445 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
CHD3-210ENST00000479080 ASB16Q96NS5 453 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
CHD3-210ENST00000479080 DHX35Q9H5Z1 703 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms