RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LAMTOR5O43504 91 aa21.28■■□□□ 1
VARS-224ENST00000479051 ATG13O75143 517 aa21.28■■□□□ 1
VARS-224ENST00000479051 TULP3O75386 442 aa21.28■■□□□ 1
VARS-224ENST00000479051 KAT7O95251 611 aa21.28■■□□□ 1
VARS-224ENST00000479051 MOCS2O96007 188 aaPredicted RBP21.28■■□□□ 1
VARS-224ENST00000479051 F9P00740 461 aa21.28■■□□□ 1
VARS-224ENST00000479051 SKILP12757 684 aa21.28■■□□□ 1
VARS-224ENST00000479051 ABCB4P21439 1286 aa21.28■■□□□ 1
VARS-224ENST00000479051 CASP14P31944 242 aa21.28■■□□□ 1
VARS-224ENST00000479051 SLC6A11P48066 632 aa21.28■■□□□ 1
VARS-224ENST00000479051 SULT1E1P49888 294 aa21.28■■□□□ 1
VARS-224ENST00000479051 PTPN5P54829 565 aa21.28■■□□□ 1
VARS-224ENST00000479051 KDSRQ06136 332 aa21.28■■□□□ 1
VARS-224ENST00000479051 NME3Q13232 169 aa21.28■■□□□ 1
VARS-224ENST00000479051 TSR1Q2NL82 804 aaKnown RBP21.28■■□□□ 1
VARS-224ENST00000479051 ZC3H12AQ5D1E8 599 aaKnown RBP21.28■■□□□ 1
VARS-224ENST00000479051 E4F1Q66K89 784 aaPredicted RBP21.28■■□□□ 1
VARS-224ENST00000479051 NAIF1Q69YI7 327 aaPredicted RBP21.28■■□□□ 1
VARS-224ENST00000479051 GRAMD4Q6IC98 578 aa21.28■■□□□ 1
VARS-224ENST00000479051 ZNF571Q7Z3V5 609 aaPredicted RBP21.28■■□□□ 1
VARS-224ENST00000479051 C12orf40Q86WS4 652 aa21.28■■□□□ 1
VARS-224ENST00000479051 VSTM4Q8IW00 320 aa21.28■■□□□ 1
VARS-224ENST00000479051 BHMTQ93088 406 aa21.28■■□□□ 1
VARS-224ENST00000479051 BTN2A3PQ96KV6 586 aa21.28■■□□□ 1
VARS-224ENST00000479051 SELENOOQ9BVL4 669 aa21.28■■□□□ 1
VARS-224ENST00000479051 FBRSL1Q9HCM7 1045 aaKnown RBP21.28■■□□□ 1
VARS-224ENST00000479051 MYOFQ9NZM1 2061 aa21.27■■□□□ 1
VARS-224ENST00000479051 ANKRD62A6NC57 917 aa21.27■■□□□ 1
VARS-224ENST00000479051 PENKP01210 267 aaPredicted RBP21.27■■□□□ 1
VARS-224ENST00000479051 KRT3P12035 628 aa21.27■■□□□ 1
VARS-224ENST00000479051 GZMAP12544 262 aa21.27■■□□□ 1
VARS-224ENST00000479051 DGKGP49619 791 aa21.27■■□□□ 1
VARS-224ENST00000479051 CCR3P51677 355 aa21.27■■□□□ 1
VARS-224ENST00000479051 PITX1P78337 314 aaPredicted RBP21.27■■□□□ 1
VARS-224ENST00000479051 PTP4A2Q12974 167 aa21.27■■□□□ 1
VARS-224ENST00000479051 MTAPQ13126 283 aa21.27■■□□□ 1
VARS-224ENST00000479051 SLC25A52Q3SY17 297 aa21.27■■□□□ 1
VARS-224ENST00000479051 FYB2Q5VWT5 728 aa21.27■■□□□ 1
VARS-224ENST00000479051 DNAJC24Q6P3W2 148 aa21.27■■□□□ 1
VARS-224ENST00000479051 MON1BQ7L1V2 547 aa21.27■■□□□ 1
VARS-224ENST00000479051 SPEM1Q8N4L4 309 aa21.27■■□□□ 1
VARS-224ENST00000479051 C3orf20Q8ND61 904 aa21.27■■□□□ 1
VARS-224ENST00000479051 TMA16Q96EY4 203 aaKnown RBP21.27■■□□□ 1
VARS-224ENST00000479051 VCPIP1Q96JH7 1222 aa21.27■■□□□ 1
VARS-224ENST00000479051 NPY6RQ99463 290 aa21.27■■□□□ 1
VARS-224ENST00000479051 RBSNQ9H1K0 784 aa21.27■■□□□ 1
VARS-224ENST00000479051 TMEM59LQ9UK28 342 aa21.27■■□□□ 1
VARS-224ENST00000479051 ARIH1Q9Y4X5 557 aaPredicted RBP21.27■■□□□ 1
VARS-224ENST00000479051 TBC1D3BA6NDS4 549 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 TMCO5BA8MYB1 307 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 RNF40O75150 1001 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 SDC4P31431 198 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 TNFRSF4P43489 277 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 DEUP1Q05D60 604 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 ANGPT1Q15389 498 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 MAMSTRQ6ZN01 415 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 PHLDB2Q86SQ0 1253 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 PGAP3Q96FM1 320 aaPredicted RBP21.26■□□□□ 0.99
VARS-224ENST00000479051 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.26■□□□□ 0.99
VARS-224ENST00000479051 ZNHIT6Q9NWK9 470 aaKnown RBP21.26■□□□□ 0.99
VARS-224ENST00000479051 PLK2Q9NYY3 685 aa21.26■□□□□ 0.99
VARS-224ENST00000479051 KCNU1A8MYU2 1149 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 TSPAN3O60637 253 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 DESP17661 470 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 FLT3P36888 993 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 EIF4EBP2Q13542 120 aaPredicted RBP21.25■□□□□ 0.99
VARS-224ENST00000479051 BRMS1LQ5PSV4 323 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 Q6ZS52 159 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 CHSY1Q86X52 802 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 CCDC117Q8IWD4 279 aaPredicted RBP21.25■□□□□ 0.99
VARS-224ENST00000479051 MCOLN2Q8IZK6 566 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 ZNF557Q8N988 423 aaPredicted RBP21.25■□□□□ 0.99
VARS-224ENST00000479051 TERB1Q8NA31 727 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 HJURPQ8NCD3 748 aaPredicted RBP21.25■□□□□ 0.99
VARS-224ENST00000479051 PRSS33Q8NF86 280 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 OR8K1Q8NGG5 319 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 NT5C3BQ969T7 300 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 ACDQ96AP0 544 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 TRIM11Q96F44 468 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 TBCBQ99426 244 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 SLC2A11Q9BYW1 496 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 WDCPQ9H6R7 721 aa21.25■□□□□ 0.99
VARS-224ENST00000479051 A0A0A0MRY4 1105 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 SIGLEC16A6NMB1 481 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 DDX3XO00571 662 aaKnown RBP eCLIP21.24■□□□□ 0.99
VARS-224ENST00000479051 RTN2O75298 545 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 PDGFRAP16234 1089 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 RDXP35241 583 aaKnown RBP21.24■□□□□ 0.99
VARS-224ENST00000479051 CXCL12P48061 93 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 FAM133BQ5BKY9 247 aaKnown RBP21.24■□□□□ 0.99
VARS-224ENST00000479051 MPP7Q5T2T1 576 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 PIK3R6Q5UE93 754 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 RFWD3Q6PCD5 774 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 DRC7Q8IY82 874 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 PHTF2Q8N3S3 785 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 EMC1Q8N766 993 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 TAS2R14Q9NYV8 317 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 FBXO4Q9UKT5 387 aa21.24■□□□□ 0.99
VARS-224ENST00000479051 KIAA1549LQ6ZVL6 1849 aa21.23■□□□□ 0.99
VARS-224ENST00000479051 GOLGA6L7A0A1B0GV03 622 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms