RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 MT-ND5P03915 603 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 RPLP0P05388 317 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 WEE2P0C1S8 567 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TFAMQ00059 246 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC34A1Q06495 639 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 GINS1Q14691 196 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PON3Q15166 354 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 IER5Q5VY09 327 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DNAJC14Q6Y2X3 702 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 ARCQ7LC44 396 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NME9Q86XW9 330 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC22A15Q8IZD6 547 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC30A5Q8TAD4 765 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PAGR1Q9BTK6 254 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DPH5Q9H2P9 285 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 HOXC10Q9NYD6 342 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MYH8P13535 1937 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 RPTORQ8N122 1335 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SYNJ2BP-COX16A0A087WUM0 186 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 EFCAB7A8K855 629 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SCO1O75880 301 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 IL18RAPO95256 599 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CCNE2O96020 404 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 GSTM1P09488 218 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ATF6P18850 670 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SERPINA4P29622 427 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 R3HDM1Q15032 1099 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 TOMM20Q15388 145 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MAN2A1Q16706 1144 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 EFHC1Q5JVL4 640 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CARD17Q5XLA6 110 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PNLDC1Q8NA58 520 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 SMG7Q92540 1137 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 EXT2Q93063 718 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 BTF3L4Q96K17 158 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TUBGCP5Q96RT8 1024 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ACOX2Q99424 681 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 FAIM2Q9BWQ8 316 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 GPATCH2Q9NW75 528 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 COX16Q9P0S2 106 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NINQ8N4C6 2090 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 LRRC9Q6ZRR7 1453 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 IL2RBP14784 551 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ACAT1P24752 427 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 ADSLP30566 484 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 GRSF1Q12849 480 aaKnown RBP eCLIP5.55□□□□□ -1.52
USF3-202ENST00000478658 SGCGQ13326 291 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC9A4Q6AI14 798 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TTC33Q6PID6 262 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 TMEM192Q8IY95 271 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 OR6P1Q8NGX9 317 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 PRELID3BQ9Y3B1 194 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 F8W031 263 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 TSPAN19P0C672 248 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DNAJA1P31689 397 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 MRPL49Q13405 166 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 VPS72Q15906 364 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 BCL2A1Q16548 175 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TMEM44Q2T9K0 475 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MRNIPQ6NTE8 343 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CAND1Q86VP6 1230 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 GATAD2AQ86YP4 633 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ANKMY2Q8IV38 441 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CCNYL1Q8N7R7 359 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.55□□□□□ -1.52
USF3-202ENST00000478658 RAET1EQ8TD07 263 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ING5Q8WYH8 240 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 JADE3Q92613 823 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NXPE2Q96DL1 559 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TMEM138Q9NPI0 162 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CYLDQ9NQC7 956 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DMGDHQ9UI17 866 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 ARHGEF12Q9NZN5 1544 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 C9orf84Q5VXU9 1444 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ANKDD1BA6NHY2 528 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PITPNM1O00562 1244 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 IFNA1P01562 189 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TCF7P36402 384 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC11A2P49281 568 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SPOCK1Q08629 439 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CERKLQ49MI3 558 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 RBM48Q5RL73 367 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 IDNKQ5T6J7 187 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ZNF772Q68DY9 489 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 PROSER1Q86XN7 944 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 EPS8L3Q8TE67 593 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 RERGQ96A58 199 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 COX4I2Q96KJ9 171 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 FAM83DQ9H4H8 585 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ADPRHL2Q9NX46 363 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NUMA1Q14980 2115 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NCAM2O15394 837 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 VPS26AO75436 327 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 KRT36O76013 467 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ADAMTS2O95450 1211 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms