RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.6□□□□□ -0.07
NPHP4-208ENST00000478423 HAO1Q9UJM8 370 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 FAM208AQ9UK61 1670 aaKnown RBP14.6□□□□□ -0.07
NPHP4-208ENST00000478423 MGEA5O60502 916 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 VPS26AO75436 327 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 CD52P31358 61 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 FLT3LGP49771 235 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 AQP5P55064 265 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 NPNTQ6UXI9 565 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 PALB2Q86YC2 1186 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 LRRC19Q9H756 370 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 SLC40A1Q9NP59 571 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 XPNPEP1Q9NQW7 623 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 DNAJC16Q9Y2G8 782 aa14.6□□□□□ -0.07
NPHP4-208ENST00000478423 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 TM9SF1O15321 606 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 B4GALT4O60513 344 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 VAPBO95292 243 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 MMP8P22894 467 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 CSHL1Q14406 222 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 SETD3Q86TU7 594 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-208ENST00000478423 RNF157Q96PX1 679 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 KDM4CQ9H3R0 1056 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 MAGEB16A2A368 324 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 SOWAHBA6NEL2 793 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 COPAP53621 1224 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 BBS12Q6ZW61 710 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 HELQQ8TDG4 1101 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 LENG9Q96B70 501 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 MBOAT7Q96N66 472 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 MRPL9Q9BYD2 267 aaKnown RBP14.59□□□□□ -0.07
NPHP4-208ENST00000478423 NIFKQ9BYG3 293 aaKnown RBP14.59□□□□□ -0.07
NPHP4-208ENST00000478423 UNKQ9C0B0 810 aaKnown RBP14.59□□□□□ -0.07
NPHP4-208ENST00000478423 IL1RL2Q9HB29 575 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 RBAK-RBAKDNI3L0D1 243 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 M0R2N6 131 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 FSCN2O14926 492 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 LIASO43766 372 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 CABYRO75952 493 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 CRTAMO95727 393 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
NPHP4-208ENST00000478423 MMRN1Q13201 1228 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 TUBGCP3Q96CW5 907 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 ZBTB10Q96DT7 871 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 BRD8Q9H0E9 1235 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 ATP13A1Q9HD20 1204 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 TBC1D13Q9NVG8 400 aa14.59□□□□□ -0.07
NPHP4-208ENST00000478423 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.07
NPHP4-208ENST00000478423 TOMM70O94826 608 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 SERPIND1P05546 499 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 GRK2P25098 689 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 WEE1P30291 646 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 ICAM3P32942 547 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 TRIP10Q15642 601 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 ZC3H12AQ5D1E8 599 aaKnown RBP14.58□□□□□ -0.07
NPHP4-208ENST00000478423 AARS2Q5JTZ9 985 aaKnown RBP14.58□□□□□ -0.07
NPHP4-208ENST00000478423 DLK2Q6UY11 383 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 BCAS3Q9H6U6 928 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 TMEM39AQ9NV64 488 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 RIC8BQ9NVN3 520 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 MARCH2Q9P0N8 246 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 WARS2Q9UGM6 360 aaKnown RBP14.58□□□□□ -0.07
NPHP4-208ENST00000478423 PCDHB12Q9Y5F1 795 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 SLIT2O94813 1529 aa14.58□□□□□ -0.07
NPHP4-208ENST00000478423 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 TRPC5OSA6NMA1 111 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 GLP2RO95838 553 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 RPL22P35268 128 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 DRG2P55039 364 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 FAAP100Q0VG06 881 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 ITIH4Q14624 930 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 SLC45A4Q5BKX6 768 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 PPP1R26Q5T8A7 1209 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 RETSATQ6NUM9 610 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 SUGP1Q8IWZ8 645 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 CIPCQ9C0C6 399 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 TTYH3Q9C0H2 523 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 MAFBQ9Y5Q3 323 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 MYO9BQ13459 2157 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 HACD1B0YJ81 288 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 GOLGA8TH3BQL2 631 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 SPTLC1O15269 473 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 ONECUT3O60422 494 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 TSPAN3O60637 253 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 MYL4P12829 197 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 DARSP14868 501 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 KBTBD12Q3ZCT8 623 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 PTPN20Q4JDL3 420 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 C16orf89Q6UX73 402 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 MTDHQ86UE4 582 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 PGBD3Q8N328 593 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 RAB42Q8N4Z0 105 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 CCDC126Q96EE4 140 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 FAM105AQ9NUU6 356 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 NCKIPSDQ9NZQ3 722 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 UBOX5O94941 541 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms