RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ASPHD1Q5U4P2 390 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 RNF219Q5W0B1 726 aaPredicted RBP1.77□□□□□ -2.13
CALD1-218ENST00000478075 ISM2Q6H9L7 571 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 PGM2L1Q6PCE3 622 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 RAPH1Q70E73 1250 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 SMIM29Q86T20 159 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 NAGSQ8N159 534 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 FAM71DQ8N9W8 422 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 POC1AQ8NBT0 407 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 C1orf162Q8NEQ5 155 aaPredicted RBP1.77□□□□□ -2.13
CALD1-218ENST00000478075 TRIM5Q9C035 493 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 ZSCAN32Q9NX65 697 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 NKX1-2Q9UD57 310 aaPredicted RBP1.77□□□□□ -2.13
CALD1-218ENST00000478075 CLIP2Q9UDT6 1046 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 SERPINB13Q9UIV8 391 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 MED16Q9Y2X0 877 aa1.77□□□□□ -2.13
CALD1-218ENST00000478075 C16orf96A6NNT2 1141 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 RGS14O43566 566 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 IDUAP35475 653 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 KRT85P78386 507 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 DEUP1Q05D60 604 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 GPS2Q13227 327 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 KCNC3Q14003 757 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 ST3GAL2Q16842 350 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 TMEM30BQ3MIR4 351 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 DNTTIP2Q5QJE6 756 aaKnown RBP1.76□□□□□ -2.13
CALD1-218ENST00000478075 GDPD4Q6W3E5 623 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 ZNF497Q6ZNH5 498 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 Q6ZTK2 550 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 LHFPL2Q6ZUX7 228 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 NOP9Q86U38 636 aaKnown RBP1.76□□□□□ -2.13
CALD1-218ENST00000478075 CLIP4Q8N3C7 705 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 WDR66Q8TBY9 1149 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 COG1Q8WTW3 980 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 ASAP1Q9ULH1 1129 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 ADAM18Q9Y3Q7 739 aa1.76□□□□□ -2.13
CALD1-218ENST00000478075 A0A087WWL8 130 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 EXOC5O00471 708 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 PRAMEF2O60811 474 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 FTLP02792 175 aaPredicted RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 SOX2P48431 317 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 WDR5P61964 334 aaKnown RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 TUBA1BP68363 451 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 NKX6-1P78426 367 aaPredicted RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 ABATP80404 500 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 GAD2Q05329 585 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 ARL16Q0P5N6 197 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 CCDC15Q0P6D6 951 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 ST3GAL1Q11201 340 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 PLCB4Q15147 1175 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 CCDC144BQ3MJ40 725 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 PLA1AQ53H76 456 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 TDRD12Q587J7 1177 aaKnown RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 NPM2Q86SE8 214 aaKnown RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 TCP11L2Q8N4U5 519 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 DNAJB14Q8TBM8 379 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 TAS1R2Q8TE23 839 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 FAM216AQ8WUB2 273 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 UBXN4Q92575 508 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 KAT2BQ92831 832 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 EME1Q96AY2 570 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 FAXDC2Q96IV6 333 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 VPS50Q96JG6 964 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 TEKT5Q96M29 485 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 ZNF347Q96SE7 839 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 CINPQ9BW66 212 aaPredicted RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 SARS2Q9NP81 518 aaKnown RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 FNIP2Q9P278 1114 aa1.75□□□□□ -2.13
CALD1-218ENST00000478075 IPO11Q9UI26 975 aaKnown RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 HEMK1Q9Y5R4 338 aaPredicted RBP1.75□□□□□ -2.13
CALD1-218ENST00000478075 A0A1B0GVT2 93 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 BECN2A8MW95 431 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 CD3EAPO15446 510 aaKnown RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 PHGDHO43175 533 aaKnown RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA12O60330 932 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 LCATP04180 440 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 ARSBP15848 533 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PLS1Q14651 629 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 ACCSLQ4AC99 568 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 KHDC1LQ5JSQ8 128 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 ABLIM2Q6H8Q1 611 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 C9orf139Q6ZV77 190 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 ZNF771Q7L3S4 317 aaPredicted RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 CTU1Q7Z7A3 348 aaKnown RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 CHAC2Q8WUX2 184 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 CLMNQ96JQ2 1002 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 ATOH8Q96SQ7 321 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 SENP7Q9BQF6 1050 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 TTLL2Q9BWV7 592 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 RNF26Q9BY78 433 aaPredicted RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 ZNF696Q9H7X3 374 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 XPNPEP3Q9NQH7 507 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PRR34Q9NV39 138 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA9Q9Y5G4 932 aaKnown RBP1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA8Q9Y5G5 932 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA7Q9Y5G6 932 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA6Q9Y5G7 932 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 PCDHGA3Q9Y5H0 932 aa1.74□□□□□ -2.13
CALD1-218ENST00000478075 SPATA31A5Q5VU36 1347 aa1.73□□□□□ -2.13
CALD1-218ENST00000478075 SPATA31A7Q8IWB4 1347 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms