RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 ZCCHC17Q9NP64 241 aaKnown RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 ARHGEF3Q9NR81 526 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 SERTAD4Q9NUC0 356 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 ARPP21Q9UBL0 812 aaPredicted RBP5.52□□□□□ -1.53
VPS50-214ENST00000477935 PAXBP1Q9Y5B6 917 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 RTL9Q8NET4 1388 aa5.52□□□□□ -1.53
VPS50-214ENST00000477935 TRIM43BA6NCK2 446 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 LRRC3CA6NJW4 275 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 TLR2O60603 784 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 TFRCP02786 760 aaKnown RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 IL6RP08887 468 aaPredicted RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 JUPP14923 745 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 GPTP24298 496 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 DGKEP52429 567 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 ATXN1P54253 815 aaKnown RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 PRKG1Q13976 671 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 FAM153CQ494X1 144 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 TREML2Q5T2D2 321 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 SLC15A3Q8IY34 581 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 OR56A3Q8NH54 315 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 NTN5Q8WTR8 489 aaPredicted RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 GLG1Q92896 1179 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 TRIM43Q96BQ3 446 aaPredicted RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 SARAFQ96BY9 339 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 ZNF764Q96H86 408 aaPredicted RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 GLOD4Q9HC38 313 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 A1CFQ9NQ94 594 aaKnown RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 ZSCAN32Q9NX65 697 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 PTGFRNQ9P2B2 879 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 POLLQ9UGP5 575 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 AFF4Q9UHB7 1163 aaKnown RBP5.51□□□□□ -1.53
VPS50-214ENST00000477935 RIPOR2Q9Y4F9 1068 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 PRUNE2Q8WUY3 3088 aa5.51□□□□□ -1.53
VPS50-214ENST00000477935 KDM3BQ7LBC6 1761 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 PYCARD-AS1I3L0S3 204 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 MGEA5O60502 916 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ONECUT2O95948 504 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 FESP07332 822 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ZKSCAN1P17029 563 aaPredicted RBP5.5□□□□□ -1.53
VPS50-214ENST00000477935 NDUFB7P17568 137 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 GPD1P21695 349 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 DRD4P21917 467 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ADORA2AP29274 412 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ALDH9A1P49189 494 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 PDE6CP51160 858 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 C3orf38Q5JPI3 329 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 DEPDC1Q5TB30 811 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 DPY19L2P1Q6NXN4 242 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ZNF575Q86XF7 245 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 TBC1D16Q8TBP0 767 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 BPIFB1Q8TDL5 484 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ZNF384Q8TF68 577 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 SPSB4Q96A44 273 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 TIFAQ96CG3 184 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 CHPF2Q9P2E5 772 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 ADAM21Q9UKJ8 722 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 OGDHLQ9ULD0 1010 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 SH2B3Q9UQQ2 575 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 TBC1D30Q9Y2I9 924 aa5.5□□□□□ -1.53
VPS50-214ENST00000477935 UBN2Q6ZU65 1347 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 MYO3BQ8WXR4 1341 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 BDP1A6H8Y1 2624 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 KIF20BQ96Q89 1820 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 A1L4Q6 167 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 MBD3L4A6NDZ8 208 aaPredicted RBP5.49□□□□□ -1.53
VPS50-214ENST00000477935 MBD3L3A6NE82 208 aaPredicted RBP5.49□□□□□ -1.53
VPS50-214ENST00000477935 KCNQ3O43525 872 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 PROP1O75360 226 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 MAP4K4O95819 1239 aaPredicted RBP5.49□□□□□ -1.53
VPS50-214ENST00000477935 C1RP00736 705 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 HMOX1P09601 288 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 KLRC1P26715 233 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 PRKAG1P54619 331 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 RPS16P62249 146 aaKnown RBP5.49□□□□□ -1.53
VPS50-214ENST00000477935 FMO1Q01740 532 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 SEMA5AQ13591 1074 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 HSP90AB3PQ58FF7 597 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 ZDHHC24Q6UX98 284 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 AMIGO2Q86SJ2 522 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 MORC1Q86VD1 984 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 DGKHQ86XP1 1220 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 PPP1R9BQ96SB3 815 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 DEFB129Q9H1M3 183 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 ZNF287Q9HBT7 754 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 XPNPEP3Q9NQH7 507 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 COL20A1Q9P218 1284 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 PCDHGB6Q9Y5F9 930 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 UBR2Q8IWV8 1755 aa5.49□□□□□ -1.53
VPS50-214ENST00000477935 LAMA2P24043 3122 aaKnown RBP5.49□□□□□ -1.53
VPS50-214ENST00000477935 CEMIPQ8WUJ3 1361 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 H0YIZ8 118 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 FBLP22087 321 aaKnown RBP5.48□□□□□ -1.53
VPS50-214ENST00000477935 CYP2C18P33260 490 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 PSMC4P43686 418 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 NHLH1Q02575 133 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 ANKRD16Q6P6B7 361 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 SESTD1Q86VW0 696 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 ABRAQ8N0Z2 381 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms