RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SERPINA13PQ6UXR4 307 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 SPATS2Q86XZ4 545 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 SLC25A45Q8N413 288 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 FAM26EQ8N5C1 309 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 NECAB1Q8N987 351 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 EXTL1Q92935 676 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 DEPDC7Q96QD5 511 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 CCNL2Q96S94 520 aaPredicted RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 B3GNT5Q9BYG0 378 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 ELOVL4Q9GZR5 314 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 NACA2Q9H009 215 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 PARVGQ9HBI0 331 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 PRSS16Q9NQE7 514 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 FBN2P35556 2912 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 CLDN5O00501 218 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 JAK2O60674 1132 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 KLKB1P03952 638 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 DNTTP04053 509 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 FAM163BP0C2L3 166 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 RBMS1P29558 406 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 ABCD1P33897 745 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 TOB1P50616 345 aaPredicted RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 SLC5A3P53794 718 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 GALCP54803 685 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 FOXK1P85037 733 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 POSTNQ15063 836 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 ZRSR1Q15695 479 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 ISXQ2M1V0 245 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 SGO2Q562F6 1265 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 PAQR9Q6ZVX9 377 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 USP30Q70CQ3 517 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 ANKS1BQ7Z6G8 1248 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 BRSK2Q8IWQ3 736 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 POMGNT1Q8WZA1 660 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 HPDLQ96IR7 371 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 PLIN2Q99541 437 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 MRPL45Q9BRJ2 306 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 FAM213AQ9BRX8 229 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 CIPCQ9C0C6 399 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 FOXP1Q9H334 677 aaPredicted RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 DPEP3Q9H4B8 488 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 ST6GALNAC4Q9H4F1 302 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 AASDHPPTQ9NRN7 309 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 COMMD8Q9NX08 183 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 OSER1Q9NX31 292 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 LSM7Q9UK45 103 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 SATB2Q9UPW6 733 aa7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 UTP20O75691 2785 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-205ENST00000477888 A0A1B0GVM2 712 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 BLACEA4D250 179 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 FAM47DPA6NHR8 397 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 EPB41L2O43491 1005 aaKnown RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 TACC1O75410 805 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 REC8O95072 547 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 CKMT1AP12532 417 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ATP5C1P36542 298 aaKnown RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 PRPHP41219 470 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 RIPPLY3P57055 190 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GUCY1B3Q02153 619 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 IGFBP7Q16270 282 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ME3Q16798 604 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ZSCAN23Q3MJ62 389 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 TTC31Q49AM3 519 aaPredicted RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 KLHDC10Q6PID8 442 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 NCEH1Q6PIU2 408 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 CLEC14AQ86T13 490 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 CCDC83Q8IWF9 413 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 OXR1Q8N573 874 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ZNF366Q8N895 744 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 TMC2Q8TDI7 906 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GTF3C6Q969F1 213 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GRAMD1AQ96CP6 724 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 SGF29Q96ES7 293 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 LIN37Q96GY3 246 aaPredicted RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ARHGAP9Q9BRR9 750 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 STRA6Q9BX79 667 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 MTMR12Q9C0I1 747 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 GZF1Q9H116 711 aaPredicted RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 SLC25A18Q9H1K4 315 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 EPN3Q9H201 632 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 FBRSQ9HAH7 460 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 PDE11AQ9HCR9 933 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 TJP2Q9UDY2 1190 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 SERGEFQ9UGK8 458 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 ATXN7L1Q9ULK2 861 aaPredicted RBP7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 PCDHGA8Q9Y5G5 932 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 NUMA1Q14980 2115 aa7.7□□□□□ -1.18
SPTLC1-205ENST00000477888 PMS2P1A4D2B8 440 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 NOBOXO60393 691 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 SDC3O75056 442 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 STC2O76061 302 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 FAM13AO94988 1023 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 GJB6O95452 261 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 GP1BAP07359 652 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 GIMD1P0DJR0 217 aa7.69□□□□□ -1.18
SPTLC1-205ENST00000477888 POU3F2P20265 443 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms