RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 CKAP5Q14008 2032 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 FAM47DPA6NHR8 397 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 GREM1O60565 184 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 RTN3O95197 1032 aaPredicted RBP10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 WNT1P04628 370 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 IGHV4-34P06331 123 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 STAT6P42226 847 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 SLC12A3P55017 1021 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 MFAP3P55082 362 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 WNT7BP56706 349 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 ZSCAN23Q3MJ62 389 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 SLFN12LQ6IEE8 588 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 SERPINA13PQ6UXR4 307 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 MYCT1Q8N699 235 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 PDILTQ8N807 584 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 CACTINQ8WUQ7 758 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 SORCS1Q8WY21 1168 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 DHX58Q96C10 678 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 CALML4Q96GE6 196 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 EPSTI1Q96J88 318 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 CDK5RAP3Q96JB5 506 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 PLIN2Q99541 437 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 MMTAG2Q9BU76 263 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 CIPCQ9C0C6 399 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 GDF3Q9NR23 364 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 AASDHPPTQ9NRN7 309 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 CCDC39Q9UFE4 941 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 USP25Q9UHP3 1055 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 HOOK1Q9UJC3 728 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 LSM7Q9UK45 103 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 FBXO10Q9UK96 956 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 MAN2B2Q9Y2E5 1009 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 SLC27A6Q9Y2P4 619 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 FBN2P35556 2912 aa10.22□□□□□ -0.77
SMARCB1-206ENST00000477836 USP9YO00507 2555 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 A0A1W2PPC4 97 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 POLR2DO15514 142 aaKnown RBP10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SLC26A4O43511 780 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ZNF202O95125 648 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 LETM1O95202 739 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 TBX18O95935 607 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 DNTTP04053 509 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 PLA2G4BP0C869 781 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ITGB6P18564 788 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SCP2P22307 547 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 TUBP50607 506 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 RBP5P82980 135 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 POU5F1Q01860 360 aaKnown RBP10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ARID5AQ03989 594 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 PROX2Q3B8N5 592 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ARL13BQ3SXY8 428 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SGO2Q562F6 1265 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ARSHQ5FYA8 562 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SFMBT2Q5VUG0 894 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SNX30Q5VWJ9 437 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 KIAA0895LQ68EN5 471 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 HIST2H2BCQ6DN03 193 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 DPH6Q7L8W6 267 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 CEP57L1Q8IYX8 460 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 IQUBQ8NA54 791 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SCAMP5Q8TAC9 235 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 CXorf38Q8TB03 319 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 POMGNT1Q8WZA1 660 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 CCDC97Q96F63 343 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 P2RY11Q96G91 374 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 TIGD1Q96MW7 591 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ZNF518BQ9C0D4 1074 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ELOVL4Q9GZR5 314 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 SGK2Q9HBY8 427 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ELOVL2Q9NXB9 296 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 KCND2Q9NZV8 630 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 ITGA11Q9UKX5 1188 aa10.21□□□□□ -0.77
SMARCB1-206ENST00000477836 CREBBPQ92793 2442 aa10.21□□□□□ -0.78
SMARCB1-206ENST00000477836 A0A087X0B3 334 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 SYCE3A1L190 88 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CLDN5O00501 218 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 TLR5O60602 858 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 FAM13AO94988 1023 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 FAM87AP0C7U9 286 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CD38P28907 300 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 RBMS1P29558 406 aaKnown RBP10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 DAB2P98082 770 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 GTF2BQ00403 316 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 GOLGA8FQ08AF8 430 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 GOLGA8DPQ0D2H9 430 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CAMK2GQ13555 558 aaPredicted RBP10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 E2F5Q15329 346 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CAMK4Q16566 473 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 C3orf38Q5JPI3 329 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 CDCP2Q5VXM1 449 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 RRAGBQ5VZM2 374 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 XKR5Q6UX68 686 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 ANKS1BQ7Z6G8 1248 aa10.2□□□□□ -0.78
SMARCB1-206ENST00000477836 EXTL1Q92935 676 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms