RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TRPC5OSA6NMA1 111 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 GNGT2O14610 69 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 MPOP05164 745 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 SCUBE1Q8IWY4 988 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 STKLD1Q8NE28 680 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 ZNF398Q8TD17 642 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 FZD8Q9H461 694 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 LTFP02788 710 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 CCDC153Q494R4 210 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 OVOS1Q6IE37 1185 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 ADAM32Q8TC27 787 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 SIKE1Q9BRV8 207 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 TRPV2Q9Y5S1 764 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 SERPINB3P29508 390 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 CCR1P32246 355 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 SLC20A2Q08357 652 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 DUSP28Q4G0W2 176 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 ZNF512Q96ME7 567 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 TMEM237Q96Q45 408 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 YIPF3Q9GZM5 350 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 PCDH18Q9HCL0 1135 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 DMAP1Q9NPF5 467 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 LGALS13Q9UHV8 139 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 RUVBL2Q9Y230 463 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 ACOT9Q9Y305 439 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 FZD9O00144 591 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 NDUFS3O75489 264 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 UNC5CO95185 931 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 NFKBIAP25963 317 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 SP2Q02086 613 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 AGAP9Q5VTM2 703 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 WSCD1Q658N2 575 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 SLC4A11Q8NBS3 891 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 TSPAN18Q96SJ8 248 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 FICDQ9BVA6 458 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 PIH1D1Q9NWS0 290 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 MSCO60682 206 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 ATP5BP06576 529 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 HABP4Q5JVS0 413 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 HASPINQ8TF76 798 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 TMA16Q96EY4 203 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 CELF6Q96J87 481 aaKnown RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 UBP1Q9NZI7 540 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 GRIN2DO15399 1336 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 TULP2O00295 520 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 CBX6O95503 412 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 ETFBP38117 255 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 XRCC4Q13426 336 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 NFE2Q16621 373 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 SOCS4Q8WXH5 440 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 SGF29Q96ES7 293 aa15.03■□□□□ -0
HDAC6-220ENST00000477528 RPRD1AQ96P16 312 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
HDAC6-220ENST00000477528 TCRBV9S1A1TA0A576 114 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 DNAJB2P25686 324 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 SLC1A6P48664 564 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 TMPRSS6Q8IU80 811 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 GIPC2Q8TF65 315 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 CCDC126Q96EE4 140 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 GAD1Q99259 594 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 GPR88Q9GZN0 384 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 PCDHA11Q9Y5I1 949 aa15.02■□□□□ -0
HDAC6-220ENST00000477528 MANSC4A6NHS7 340 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 ERI2A8K979 691 aaKnown RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 POMCP01189 267 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 YBX3P16989 372 aaKnown RBP eCLIP15.02□□□□□ -0.019e-6■■■□□ 18.1
HDAC6-220ENST00000477528 AVPR1AP37288 418 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 RNASEH2BQ5TBB1 312 aaKnown RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 LRRC8EQ6NSJ5 796 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 LZTR1Q8N653 840 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 TRIML2Q8N7C3 387 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 PIK3R5Q8WYR1 880 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 KCNK4Q9NYG8 393 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 PRPF4O43172 522 aaKnown RBP eCLIP15.02□□□□□ -0.012e-6■■■■□ 24.5
HDAC6-220ENST00000477528 THRAP10827 490 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 MATKP42679 507 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 MRPS35P82673 323 aaKnown RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 BEX3Q00994 111 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 MED21Q13503 144 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 KCNMB4Q86W47 210 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 PCSK9Q8NBP7 692 aaKnown RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 CPT1BQ92523 772 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 TEPSINQ96N21 525 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 EBNA1BP2Q99848 306 aaKnown RBP15.02□□□□□ -0.01
HDAC6-220ENST00000477528 CXorf56Q9H5V9 222 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 ZNF112Q9UJU3 913 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 SLC8A2Q9UPR5 921 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 MAST2Q6P0Q8 1798 aa15.02□□□□□ -0.01
HDAC6-220ENST00000477528 A0A1W2PPM1 405 aa15.01□□□□□ -0.01
HDAC6-220ENST00000477528 SLCO1B7G3V0H7 640 aa15.01□□□□□ -0.01
HDAC6-220ENST00000477528 CLGNO14967 610 aa15.01□□□□□ -0.01
HDAC6-220ENST00000477528 ANGPT2O15123 496 aa15.01□□□□□ -0.01
HDAC6-220ENST00000477528 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
HDAC6-220ENST00000477528 ASPAP45381 313 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms