RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LBHD1Q9BQE6 289 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TTPALQ9BTX7 342 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 GPR62Q9BZJ7 368 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RNF208Q9H0X6 261 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SH2D4AQ9H788 454 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SUDS3Q9H7L9 328 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RMI1Q9H9A7 625 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 MRPL44Q9H9J2 332 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 JPH1Q9HDC5 661 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RBM28Q9NW13 759 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ZSCAN32Q9NX65 697 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 DDX43Q9NXZ2 648 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 AATFQ9NY61 560 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 C6orf203Q9P0P8 240 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 HCN3Q9P1Z3 774 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CGNQ9P2M7 1197 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FTSJ1Q9UET6 329 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 LIMA1Q9UHB6 759 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TSPYL4Q9UJ04 414 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FBXL7Q9UJT9 491 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 LEF1Q9UJU2 399 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TCFL5Q9UL49 500 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TRAF3IP3Q9Y228 551 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 XIRP2A4UGR9 3374 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CLTCQ00610 1675 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ATP7AQ04656 1500 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ATRNL1Q5VV63 1379 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MYBBP1AQ9BQG0 1328 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 A0A0A6YYJ9 748 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TRAV34A0A0B4J273 112 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GOLGA6L10A0A0M3HER8 536 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ARHGEF37A1IGU5 675 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PRAMEF22A3QJZ6 481 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RGSL1A5PLK6 1076 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GLOD5A6NK44 160 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 AQP7P3A6NL99 342 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SHISA8B8ZZ34 492 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 H0Y858 1186 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 BOLA2-SMG1P6H3BVE0 249 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SGK1O00141 431 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 O00370 1275 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 DNM1LO00429 736 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 HGSO14964 777 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PROM1O43490 865 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CCNT2O60583 730 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 HNRNPCL1O60812 293 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CUTAO60888 179 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 OPHN1O60890 802 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SMPD2O60906 423 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 LILRB5O75023 590 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PEX11AO75192 247 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RTN2O75298 545 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SEC14L2O76054 403 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PDE8BO95263 885 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TRIM16O95361 564 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 LARGE1O95461 756 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FTCDO95954 541 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GNAI2P04899 355 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 EIF2S1P05198 315 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SYPP08247 313 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GNAI3P08754 354 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RHOXF2BP0C7M4 288 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 IL1R1P14778 569 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FERP16591 822 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TPH1P17752 444 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TYMPP19971 482 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CASTP20810 708 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TCEA1P23193 301 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TMOD1P28289 359 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PBLDP30039 288 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ECHS1P30084 290 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 HOXC8P31273 242 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SLC5A2P31639 672 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GGT5P36269 586 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CASP3P42574 277 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PIK3CGP48736 1102 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 HARS2P49590 506 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 EIF3BP55884 814 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GNAI1P63096 354 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 IRX3P78415 501 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 KRT17Q04695 432 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TEFQ10587 303 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 INSCQ1MX18 579 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 C15orf59Q2T9L4 293 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 AMOTQ4VCS5 1084 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF628Q5EBL2 1059 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 EMC4Q5J8M3 183 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RTP2Q5QGT7 225 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SFRP5Q5T4F7 317 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PRAMEF18Q5VWM3 479 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CST9LP1Q5W188 147 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 STEAP3Q658P3 488 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RAP1GAP2Q684P5 730 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CAVIN1Q6NZI2 390 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 KLHL35Q6PF15 583 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 DRICH1Q6PGQ1 229 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 NCEH1Q6PIU2 408 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms