RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 DGAT2L7PQ6IED9 249 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 DPP8Q6V1X1 898 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 CEP97Q8IW35 865 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 FAM126BQ8IXS8 530 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 CCAR2Q8N163 923 aaKnown RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 GALNT4Q8N4A0 578 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 TMCO5AQ8N6Q1 288 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 FAM181AQ8N9Y4 354 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 MAFAQ8NHW3 353 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 CCDC43Q96MW1 224 aaKnown RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 HTATIP2Q9BUP3 242 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 FTOQ9C0B1 505 aaKnown RBP eCLIP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 SIK2Q9H0K1 926 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 ABCG4Q9H172 646 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 RANBP17Q9H2T7 1088 aaKnown RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 UNKLQ9H9P5 680 aaKnown RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 SLC35C2Q9NQQ7 365 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 LMCD1Q9NZU5 365 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 XPR1Q9UBH6 696 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 DKK4Q9UBT3 224 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 MAFFQ9ULX9 164 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 CNTN6Q9UQ52 1028 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 RUVBL1Q9Y265 456 aaKnown RBP7.35□□□□□ -1.23
LRCH3-215ENST00000476664 ACTL7AQ9Y615 435 aa7.35□□□□□ -1.23
LRCH3-215ENST00000476664 CDH23Q9H251 3354 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 CENPJQ9HC77 1338 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-215ENST00000476664 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 C9orf172C9J069 976 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 TNPO2O14787 897 aaKnown RBP7.34□□□□□ -1.23
LRCH3-215ENST00000476664 SRGAP3O43295 1099 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 SLU7O95391 586 aaKnown RBP7.34□□□□□ -1.23
LRCH3-215ENST00000476664 CYP2C9P11712 490 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 DESP17661 470 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 FPR1P21462 350 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 NFKBIAP25963 317 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 PTPN7P35236 360 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 BSGP35613 385 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 HARS2P49590 506 aaKnown RBP7.34□□□□□ -1.23
LRCH3-215ENST00000476664 ANTXR2P58335 489 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 CHRNEQ04844 493 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 TBL3Q12788 808 aaKnown RBP7.34□□□□□ -1.23
LRCH3-215ENST00000476664 SP140Q13342 867 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 LAPTM4AQ15012 233 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 BMP2KLQ5H9B9 411 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 FCRL6Q6DN72 434 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 TATDN1Q6P1N9 297 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 CNSTQ6PJW8 725 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 TEPPQ6URK8 271 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 ZDHHC24Q6UX98 284 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 RASGRP2Q7LDG7 609 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 PIK3C3Q8NEB9 887 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 GDAP1Q8TB36 358 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 ZFPM2Q8WW38 1151 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 NACC1Q96RE7 527 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 MED15Q96RN5 788 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 USP44Q9H0E7 712 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 SLC25A18Q9H1K4 315 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 SMARCAD1Q9H4L7 1026 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 PLAGL2Q9UPG8 496 aa7.34□□□□□ -1.23
LRCH3-215ENST00000476664 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 KDM3BQ7LBC6 1761 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 PNMA6EA0A0J9YXQ4 647 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 H7C4K7 107 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 J3KTA2 159 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 TULP3O75386 442 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 ITGA10O75578 1167 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 B3GALNT1O75752 331 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GOSR1O95249 250 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 ATP5BP06576 529 aaKnown RBP7.33□□□□□ -1.24
LRCH3-215ENST00000476664 FBLN1P23142 703 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 PTDSS1P48651 473 aaKnown RBP7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GMPSP49915 693 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-215ENST00000476664 MRE11P49959 708 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 IL13RA1P78552 427 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 CD83Q01151 205 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 PTP4A2Q12974 167 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GPS1Q13098 491 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GRM4Q14833 912 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 MMEL1Q495T6 779 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GALNTL6Q49A17 601 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 FAM83HQ6ZRV2 1179 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-215ENST00000476664 BTN2A1Q7KYR7 527 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 SPPL2CQ8IUH8 684 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 CCDC170Q8IYT3 715 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 NAT8LQ8N9F0 302 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 TRIML1Q8N9V2 468 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 POMGNT2Q8NAT1 580 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 STON2Q8WXE9 905 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 SHISA4Q96DD7 197 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 KTI12Q96EK9 354 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-215ENST00000476664 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 SLC25A32Q9H2D1 315 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 CYP4F11Q9HBI6 524 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 GPR35Q9HC97 309 aa7.33□□□□□ -1.24
LRCH3-215ENST00000476664 TAB2Q9NYJ8 693 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms