RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 DENND1BQ6P3S1 775 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 GJB7Q6PEY0 223 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 BEND5Q7L4P6 421 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 ANKS1BQ7Z6G8 1248 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 TMEM110Q86TL2 294 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 CREBRFQ8IUR6 639 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 SYT12Q8IV01 421 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 ABCA7Q8IZY2 2146 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 UCMAQ8WVF2 138 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 GOLGA1Q92805 767 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 ERLEC1Q96DZ1 483 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 MRGPRX1Q96LB2 322 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 EDEM2Q9BV94 578 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 LSM14BQ9BX40 385 aaKnown RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 MIS12Q9H081 205 aa11.25□□□□□ -0.61
SEC13-214ENST00000476597 EVLQ9UI08 416 aaPredicted RBP11.25□□□□□ -0.61
SEC13-214ENST00000476597 GOLGA6L7A0A1B0GV03 622 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 GTPBP10A4D1E9 387 aaKnown RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 C4orf47A7E2U8 309 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 BECN2A8MW95 431 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 CDX4O14627 284 aaPredicted RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 MED7O43513 233 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 ACSL4O60488 711 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 ADRB1P08588 477 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 NCAM1P13591 858 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 HLA-FP30511 346 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 DPP6P42658 865 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 TBX4P57082 545 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 RPL6Q02878 288 aaKnown RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 ZNF234Q14588 700 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 STARD3Q14849 445 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 FUT11Q495W5 492 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 MPP7Q5T2T1 576 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 PEAR1Q5VY43 1037 aaPredicted RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 LYSMD4Q5XG99 296 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 NUGGCQ68CJ6 796 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 ARMCX6Q7L4S7 300 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 KIAA0907Q7Z7F0 614 aaPredicted RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEC13-214ENST00000476597 DQX1Q8TE96 717 aaKnown RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 SLC39A13Q96H72 371 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 MKRN2Q9H000 416 aaKnown RBP11.24□□□□□ -0.61
SEC13-214ENST00000476597 SLC6A17Q9H1V8 727 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 ACP6Q9NPH0 428 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 ST7Q9NRC1 585 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 CYTH4Q9UIA0 394 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 PILRBQ9UKJ0 227 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 CYP8B1Q9UNU6 501 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 NAALADL1Q9UQQ1 740 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 SPAG17Q6Q759 2223 aa11.24□□□□□ -0.61
SEC13-214ENST00000476597 MYH10P35580 1976 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 IRAK2O43187 625 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 PAPSS1O43252 624 aaPredicted RBP11.23□□□□□ -0.61
SEC13-214ENST00000476597 THAP12O43422 761 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 KCNK5O95279 499 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 ITPKAP23677 461 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 PON1P27169 355 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 GNA15P30679 374 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 HOXD12P35452 270 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SLC11A2P49281 568 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SGSHP51688 502 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 APBA1Q02410 837 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 ZNF33AQ06730 810 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 ARHGAP44Q17R89 818 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
SEC13-214ENST00000476597 TRIM61Q5EBN2 209 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SYPL2Q5VXT5 272 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 RFWD3Q6PCD5 774 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 TMPRSS6Q8IU80 811 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 WDTC1Q8N5D0 677 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 DEFB119Q8N690 84 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 CEP76Q8TAP6 659 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 WFIKKN2Q8TEU8 576 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SORCS1Q8WY21 1168 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 SHC3Q92529 594 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 FAM149B1Q96BN6 582 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 ZNF419Q96HQ0 510 aaPredicted RBP11.23□□□□□ -0.61
SEC13-214ENST00000476597 FCRL2Q96LA5 508 aaPredicted RBP11.23□□□□□ -0.61
SEC13-214ENST00000476597 SERPINB11Q96P15 392 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 CIPCQ9C0C6 399 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 THAP9Q9H5L6 903 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 TMEM9BQ9NQ34 198 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 ITM2CQ9NQX7 267 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 TLR6Q9Y2C9 796 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 KIAA1549LQ6ZVL6 1849 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 MYO16Q9Y6X6 1858 aa11.23□□□□□ -0.61
SEC13-214ENST00000476597 MYO18AQ92614 2054 aaKnown RBP11.23□□□□□ -0.61
SEC13-214ENST00000476597 GON4LQ3T8J9 2241 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms