RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MRPS17Q9Y2R5 130 aaKnown RBP30.72■■■□□ 2.51
HOXB3-208ENST00000476342 COL4A3Q01955 1670 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 STK25O00506 426 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 MOCS2O96007 188 aaPredicted RBP30.71■■■□□ 2.51
HOXB3-208ENST00000476342 DESP17661 470 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 GPD1P21695 349 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 PTPN9P43378 593 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 PPP2R5DQ14738 602 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 FAM217AQ8IXS0 508 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 FAM3CQ92520 227 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 BTN2A3PQ96KV6 586 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 DDX50Q9BQ39 737 aaKnown RBP30.71■■■□□ 2.51
HOXB3-208ENST00000476342 TBC1D17Q9HA65 648 aa30.71■■■□□ 2.51
HOXB3-208ENST00000476342 KANSL1LA0AUZ9 987 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 ACSL4O60488 711 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 TFE3P19532 575 aaPredicted RBP30.7■■■□□ 2.5
HOXB3-208ENST00000476342 RDXP35241 583 aaKnown RBP30.7■■■□□ 2.5
HOXB3-208ENST00000476342 ANO4Q32M45 955 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 TPGS1Q6ZTW0 290 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 PIGVQ9NUD9 493 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 MYO1AQ9UBC5 1043 aa30.7■■■□□ 2.5
HOXB3-208ENST00000476342 CYBBP04839 570 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 RPL7AP62424 266 aaKnown RBP30.69■■■□□ 2.5
HOXB3-208ENST00000476342 ATP11AP98196 1134 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 CDO1Q16878 200 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 CCDC14Q49A88 953 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 BRMS1LQ5PSV4 323 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 BMP8AQ7Z5Y6 402 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 TMEM25Q86YD3 366 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 FLCNQ8NFG4 579 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 PBXIP1Q96AQ6 731 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 ADAM33Q9BZ11 813 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 THAP2Q9H0W7 228 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 WDCPQ9H6R7 721 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 MARK1Q9P0L2 795 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 CALCOCO1Q9P1Z2 691 aa30.69■■■□□ 2.5
HOXB3-208ENST00000476342 HOXC11O43248 304 aaPredicted RBP30.68■■■□□ 2.5
HOXB3-208ENST00000476342 CXCR3P49682 368 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 ZNF143P52747 638 aaPredicted RBP30.68■■■□□ 2.5
HOXB3-208ENST00000476342 VCPP55072 806 aaKnown RBP30.68■■■□□ 2.5
HOXB3-208ENST00000476342 STRADAQ7RTN6 431 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 BNIPLQ7Z465 357 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 NELL2Q99435 816 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 BBS2Q9BXC9 721 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 SPTLC3Q9NUV7 552 aa30.68■■■□□ 2.5
HOXB3-208ENST00000476342 KCNU1A8MYU2 1149 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 GPR37L1O60883 481 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 PDGFBP01127 241 aaPredicted RBP30.67■■■□□ 2.5
HOXB3-208ENST00000476342 CD72P21854 359 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 GALCP54803 685 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 C15orf59Q2T9L4 293 aaPredicted RBP30.67■■■□□ 2.5
HOXB3-208ENST00000476342 TXNDC11Q6PKC3 985 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 CCDC170Q8IYT3 715 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 IRX2Q9BZI1 471 aaPredicted RBP30.67■■■□□ 2.5
HOXB3-208ENST00000476342 LTB4R2Q9NPC1 389 aa30.67■■■□□ 2.5
HOXB3-208ENST00000476342 FAM86C2PA6NEL3 165 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 NEDD8-MDP1E9PL57 170 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 ENDOD1O94919 500 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 FECHP22830 423 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 UBXN2BQ14CS0 331 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 TMTC1Q8IUR5 882 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 CTNNBL1Q8WYA6 563 aaPredicted RBP30.66■■■□□ 2.5
HOXB3-208ENST00000476342 CHFRQ96EP1 664 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 XPO6Q96QU8 1125 aaKnown RBP30.66■■■□□ 2.5
HOXB3-208ENST00000476342 CNPY3Q9BT09 278 aa30.66■■■□□ 2.5
HOXB3-208ENST00000476342 SHISA7A6NL88 538 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 H2AFZP0C0S5 128 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 TYRP14679 529 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 CYLC1P35663 651 aaPredicted RBP30.65■■■□□ 2.5
HOXB3-208ENST00000476342 EIF2DP41214 584 aaKnown RBP30.65■■■□□ 2.5
HOXB3-208ENST00000476342 PON2Q15165 354 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 FAM133BQ5BKY9 247 aaKnown RBP30.65■■■□□ 2.5
HOXB3-208ENST00000476342 TMEM31Q5JXX7 168 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 H2AFVQ71UI9 128 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 FAM172AQ8WUF8 416 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 CENPIQ92674 756 aaPredicted RBP30.65■■■□□ 2.5
HOXB3-208ENST00000476342 CD101Q93033 1021 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 P2RY13Q9BPV8 354 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 TKTL2Q9H0I9 626 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 C11orf16Q9NQ32 467 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 ARHGEF38Q9NXL2 777 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 MIA3Q5JRA6 1907 aa30.65■■■□□ 2.5
HOXB3-208ENST00000476342 TMEM191CA6NGB0 347 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 PRR33A8MZF0 331 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 TRDMT1O14717 391 aaKnown RBP30.64■■■□□ 2.5
HOXB3-208ENST00000476342 GSDMDP57764 484 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 GAB4Q2WGN9 574 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 MPPE1Q53F39 396 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 NADSYN1Q6IA69 706 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 FNIP1Q8TF40 1166 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 DDI1Q8WTU0 396 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 OSBPL6Q9BZF3 934 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 FOXQ1Q9C009 403 aa30.64■■■□□ 2.5
HOXB3-208ENST00000476342 NDRG2Q9UN36 371 aaKnown RBP30.64■■■□□ 2.5
HOXB3-208ENST00000476342 TYW5A2RUC4 315 aaKnown RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 CCP110O43303 1012 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 PENKP01210 267 aaPredicted RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 CYP1A2P05177 515 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 OPRD1P41143 372 aa30.64■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms