RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 TCP11X1B4DZS4 312 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 M0QYT0 321 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 IFNB1P01574 187 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 ALDH2P05091 517 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 FYNP06241 537 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 CTCFP49711 727 aaPredicted RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 CCL23P55773 120 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 IL9RQ01113 521 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 TLE2Q04725 743 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 TRIM60Q495X7 471 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PPP6R3Q5H9R7 873 aaPredicted RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 EFHC2Q5JST6 749 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 RGS9BPQ6ZS82 235 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 TRPM8Q7Z2W7 1104 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 CCDC185Q8N715 623 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 GBP7Q8N8V2 638 aaPredicted RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 PCDH19Q8TAB3 1148 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 CPT1BQ92523 772 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 SLC12A4Q9UP95 1085 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PATJQ8NI35 1801 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 RPL22P35268 128 aaKnown RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 DEUP1Q05D60 604 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PDIA2Q13087 525 aaKnown RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 FBXW10Q5XX13 1052 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 BHLHA9Q7RTU4 235 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 FAM131BQ86XD5 332 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PQLC3Q8N755 202 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PLD5Q8N7P1 536 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 ANKRD42Q8N9B4 389 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 SLC9A7Q96T83 725 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 TMEM175Q9BSA9 504 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 PPP1R12CQ9BZL4 782 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 MTMR10Q9NXD2 777 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 RCOR3Q9P2K3 495 aaPredicted RBP19.74■□□□□ 0.75
SYF2-204ENST00000476231 TBK1Q9UHD2 729 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 USP3Q9Y6I4 520 aa19.74■□□□□ 0.75
SYF2-204ENST00000476231 TTC3P53804 2025 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 RBP3P10745 1247 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 ZFXP17010 805 aaPredicted RBP19.73■□□□□ 0.75
SYF2-204ENST00000476231 GATMP50440 423 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 AIF1P55008 147 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 BCAR1P56945 870 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 LRRC14Q15048 493 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 TMED2Q15363 201 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 ZBED8Q8IZ13 594 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 ATP11CQ8NB49 1132 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 DENND1AQ8TEH3 1009 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 PGAP3Q96FM1 320 aaPredicted RBP19.73■□□□□ 0.75
SYF2-204ENST00000476231 KCTD15Q96SI1 283 aaPredicted RBP19.73■□□□□ 0.75
SYF2-204ENST00000476231 TRIM62Q9BVG3 475 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 VPS37BQ9H9H4 285 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 PRDM16Q9HAZ2 1276 aa19.73■□□□□ 0.75
SYF2-204ENST00000476231 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.73■□□□□ 0.75
SYF2-204ENST00000476231 CYP2F1P24903 491 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 PITX1P78337 314 aaPredicted RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 NFE2Q16621 373 aaPredicted RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 SLC39A12Q504Y0 691 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 NUGGCQ68CJ6 796 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 MGARPQ8TDB4 240 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 FUBP3Q96I24 572 aaKnown RBP eCLIP19.72■□□□□ 0.75
SYF2-204ENST00000476231 ZNF333Q96JL9 665 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 PSMC3IPQ9P2W1 217 aaPredicted RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 ARL2BPQ9Y2Y0 163 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 COL4A4P53420 1690 aaPredicted RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 NCAM1P13591 858 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 CYP2C18P33260 490 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 GEMIN4P57678 1058 aaKnown RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 ROR1Q01973 937 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 MRPL58Q14197 206 aaKnown RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 KLHL38Q2WGJ6 581 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 NPNTQ6UXI9 565 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 BEND5Q7L4P6 421 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 TET1Q8NFU7 2136 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 SLC7A14Q8TBB6 771 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 TGS1Q96RS0 853 aaKnown RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 DHRS4Q9BTZ2 278 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 FRMD8Q9BZ67 464 aaPredicted RBP19.72■□□□□ 0.75
SYF2-204ENST00000476231 SLC40A1Q9NP59 571 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 FGFR1OP2Q9NVK5 253 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 PRKAG3Q9UGI9 489 aa19.72■□□□□ 0.75
SYF2-204ENST00000476231 SF3B1O75533 1304 aaKnown RBP eCLIP19.71■□□□□ 0.75
SYF2-204ENST00000476231 ASMTLO95671 621 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 F9P00740 461 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 GRIK1P39086 918 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 ARL4AP40617 200 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 SLC11A1P49279 550 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 GDF10P55107 478 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 ELAVL2Q12926 359 aaKnown RBP19.71■□□□□ 0.75
SYF2-204ENST00000476231 NME3Q13232 169 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 FASTKD3Q14CZ7 662 aaKnown RBP19.71■□□□□ 0.75
SYF2-204ENST00000476231 SPRED3Q2MJR0 410 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 FAM171A1Q5VUB5 890 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 C1orf228Q6PIY5 440 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 SPATA21Q7Z572 469 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 PYROXD1Q8WU10 500 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 NTAN1Q96AB6 310 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 CSPG4P5Q96PW8 444 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 SMC6Q96SB8 1091 aa19.71■□□□□ 0.75
SYF2-204ENST00000476231 TRABDQ9H4I3 376 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms