RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 HTR3CQ8WXA8 447 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 PTPRN2Q92932 1015 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 NT5C3BQ969T7 300 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 NPY6RQ99463 290 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 PDCD11Q14690 1871 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ARL5CA6NH57 179 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ZWINTO95229 277 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 SCNN1GP51170 649 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 AP1B1Q10567 949 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 SEPT7Q16181 437 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 UNC5AQ6ZN44 842 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 TFB1MQ8WVM0 346 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 SIGLEC10Q96LC7 697 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 QKIQ96PU8 341 aaKnown RBP eCLIP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ULBP1Q9BZM6 244 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 NPHS2Q9NP85 383 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 STARD13Q9Y3M8 1113 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ZNF236Q9UL36 1845 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 M0QZ92 97 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 LPXNO60711 386 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 DGKIO75912 1065 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 TSHRP16473 764 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ZFXP17010 805 aaPredicted RBP17.19■□□□□ 0.34
TVP23B-202ENST00000476139 NOS2P35228 1153 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 MAGEA6P43360 314 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ANKRD20A2Q5SQ80 823 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ANKRD20A1Q5TYW2 823 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 ANKRD20A3Q5VUR7 823 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 OTOAQ7RTW8 1153 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 UNC5BQ8IZJ1 945 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 OLFM3Q96PB7 478 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 SMOQ99835 787 aa17.19■□□□□ 0.34
TVP23B-202ENST00000476139 IQANK1A0A1B0GTG1 560 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 CBX6O95503 412 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 USP17L7P0C7H9 530 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 TRIM32Q13049 653 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 RGS9BPQ6ZS82 235 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 SAPCD2Q86UD0 394 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 CCNYQ8ND76 341 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 ZMIZ2Q8NF64 920 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 SLC7A14Q8TBB6 771 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 TSPAN18Q96SJ8 248 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 SSU72Q9NP77 194 aaKnown RBP17.18■□□□□ 0.34
TVP23B-202ENST00000476139 MYO18AQ92614 2054 aaKnown RBP17.18■□□□□ 0.34
TVP23B-202ENST00000476139 AP1G2O75843 785 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 FAM200BP0CF97 657 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 MAGEA3P43357 314 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 DEUP1Q05D60 604 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 WLSQ5T9L3 541 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 SLC26A11Q86WA9 606 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 GBP7Q8N8V2 638 aaPredicted RBP17.18■□□□□ 0.34
TVP23B-202ENST00000476139 GIMAP7Q8NHV1 300 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 GRAMD1AQ96CP6 724 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 FAM111AQ96PZ2 611 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 ARHGEF3Q9NR81 526 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 SEPT10Q9P0V9 454 aa17.18■□□□□ 0.34
TVP23B-202ENST00000476139 DAB1O75553 588 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 BMPR2Q13873 1038 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 SMAD1Q15797 465 aaKnown RBP17.17■□□□□ 0.34
TVP23B-202ENST00000476139 RNF43Q68DV7 783 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 DSTYKQ6XUX3 929 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
TVP23B-202ENST00000476139 KCTD13Q8WZ19 329 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 P2RY11Q96G91 374 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 SYT15Q9BQS2 421 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 GABRQQ9UN88 632 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 TRPV2Q9Y5S1 764 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 TRIM49D1C9J1S8 452 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 CAPN9O14815 690 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 SLC8A1P32418 973 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 BNIPLQ7Z465 357 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 MCUQ8NE86 351 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 HASPINQ8TF76 798 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 SOCS4Q8WXH5 440 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 TRIB2Q92519 343 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 PNPLA8Q9NP80 782 aa17.17■□□□□ 0.34
TVP23B-202ENST00000476139 ANP32DO95626 131 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 POMCP01189 267 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 APOEP02649 317 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 CSH1P0DML2 217 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 CSH2P0DML3 217 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 NCAM1P13591 858 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SETDB1Q15047 1291 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 TIGD5Q53EQ6 642 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 ASRGL1Q7L266 308 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 EDEM1Q92611 657 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 N4BP2L2Q92802 583 aaPredicted RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 UTP4Q969X6 686 aaKnown RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 PGLYRP2Q96PD5 576 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms