RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CLEC4CQ8WTT0 213 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 DDI1Q8WTU0 396 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 STK32AQ8WU08 396 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 SERPINB11Q96P15 392 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 TPSD1Q9BZJ3 242 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 MIS12Q9H081 205 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 ZDHHC4Q9NPG8 344 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 TCRBV21S2A2A0A5A6 115 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 ANTXRLA6NF34 631 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 BECN2A8MW95 431 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 CAPN9O14815 690 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 MSI1O43347 362 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 ADAM23O75077 832 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 RHOBTB1O94844 696 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 EPN2O95208 641 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 KCNK5O95279 499 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 MBD3O95983 291 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 NCAM1P13591 858 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 NTSR1P30989 418 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 GBP1P32455 592 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 APBA1Q02410 837 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 PTK2Q05397 1052 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 PDCLQ13371 301 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 E2F5Q15329 346 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 MPPE1Q53F39 396 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 STPG1Q5TH74 334 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 EMC10Q5UCC4 262 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 EGFLAMQ63HQ2 1017 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 DENND1BQ6P3S1 775 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 SASS6Q6UVJ0 657 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 RBM43Q6ZSC3 357 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 ANKS1BQ7Z6G8 1248 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 KBTBD6Q86V97 674 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 UNC45BQ8IWX7 931 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 FAM149B1Q96BN6 582 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 NOX5Q96PH1 765 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 ACP6Q9NPH0 428 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 STOML2Q9UJZ1 356 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 DNAJC12Q9UKB3 198 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 SLC27A6Q9Y2P4 619 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 NFE2L3Q9Y4A8 694 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 ASH1LQ9NR48 2969 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 CACNA1EQ15878 2313 aa11.87□□□□□ -0.51
NUDCD3-206ENST00000475952 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 BPTFQ12830 3046 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 E5RJQ4 531 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 NPC1O15118 1278 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ZBTB24O43167 697 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 GABBR2O75899 941 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 TPM2P07951 284 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 TBX4P57082 545 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 RING1Q06587 406 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 NNTQ13423 1086 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 EIF4HQ15056 248 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 PLK5Q496M5 336 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 TCP11X2Q5H9J9 407 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ADGRF1Q5T601 910 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 C12orf50Q8NA57 414 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 HMGB4Q8WW32 186 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 LSM14BQ9BX40 385 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 SLC2A11Q9BYW1 496 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 IRX2Q9BZI1 471 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ARRDC1-AS1Q9H2J1 176 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 ANO10Q9NW15 660 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 FBXO10Q9UK96 956 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 CEP83Q9Y592 693 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 PCDHGA5Q9Y5G8 931 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
NUDCD3-206ENST00000475952 HELZ2Q9BYK8 2649 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 GFRA2O00451 464 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 IGLV3-27P01718 113 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 HOXD9P28356 352 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 KRT9P35527 623 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 WASP42768 502 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 SLC11A2P49281 568 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 SNX16P57768 344 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 BPIFB4P59827 614 aa11.85□□□□□ -0.51
NUDCD3-206ENST00000475952 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms