RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SPAARA0A1B0GVQ0 90 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ARHGAP33O14559 1287 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 GJB3O75712 270 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SMC2O95347 1197 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 IGLV3-27P01718 113 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CFIP05156 583 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 PAEPP09466 180 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 NCAM1P13591 858 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 HLA-EP13747 358 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 LCP1P13796 627 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CD59P13987 128 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CD6P30203 668 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SLC6A4P31645 630 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 HOXD12P35452 270 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 RPL34P49207 117 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF132P52740 706 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 DAOAP59103 153 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 BNC1Q01954 994 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF252P-AS1Q0IIN9 211 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 FOXC1Q12948 553 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 MORC3Q14149 939 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CNGA2Q16280 664 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 RFWD3Q6PCD5 774 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 KIAA1324Q6UXG2 1013 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SLC36A4Q6YBV0 504 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ANKS1BQ7Z6G8 1248 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 TMPRSS6Q8IU80 811 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SCUBE3Q8IX30 993 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SCML4Q8N228 414 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 C1orf216Q8TAB5 229 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 WFDC5Q8TCV5 224 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 PLD4Q96BZ4 506 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 TMA16Q96EY4 203 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 TOE1Q96GM8 510 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CAMK1GQ96NX5 476 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 IPO9Q96P70 1041 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 TSG101Q99816 390 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 GTPBP2Q9BX10 602 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 NUSAP1Q9BXS6 441 aaKnown RBP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 SLC2A11Q9BYW1 496 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 TMEM245Q9H330 911 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 LRRC4Q9HBW1 653 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ACP6Q9NPH0 428 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CNGB3Q9NQW8 809 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 ABCC13Q9NSE7 274 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 KIAA1257Q9ULG3 409 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 STRIP2Q9ULQ0 834 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CNTN6Q9UQ52 1028 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 MYO16Q9Y6X6 1858 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 KIAA1549LQ6ZVL6 1849 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF638Q14966 1978 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MAP1BP46821 2468 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 GOLGA6L4A6NEF3 574 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 METTL12A8MUP2 240 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 UPK3BL1B0FP48 263 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 UPK3BL2E5RIL1 263 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 BIN1O00499 593 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 PSMA7O14818 248 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 TIMM44O43615 452 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 SETSIPP0DME0 302 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 TBXAS1P24557 533 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CD70P32970 193 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 GPD2P43304 727 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 HARS2P49590 506 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 STX17P56962 302 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 SLC8A3P57103 927 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 NUCB2P80303 420 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 APBA1Q02410 837 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MPPE1Q53F39 396 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 FAM133BQ5BKY9 247 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 PIK3R6Q5UE93 754 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 SYPL2Q5VXT5 272 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 KLHL10Q6JEL2 608 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MSANTD2Q6P1R3 559 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 PPM1KQ8N3J5 372 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MINDY1Q8N5J2 469 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 ZNF366Q8N895 744 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CEP76Q8TAP6 659 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CYB5D2Q8WUJ1 264 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 NELFBQ8WX92 580 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 DNASE2BQ8WZ79 361 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 GATA6Q92908 595 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MYO19Q96H55 970 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CEP63Q96MT8 703 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 NT5C1BQ96P26 610 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 SCNM1Q9BWG6 230 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 GPR174Q9BXC1 333 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 CIPCQ9C0C6 399 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 DNAI2Q9GZS0 605 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 MTG2Q9H4K7 406 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 PRDM16Q9HAZ2 1276 aa7.32□□□□□ -1.24
HDAC3-207ENST00000475549 METTL14Q9HCE5 456 aaKnown RBP7.32□□□□□ -1.24
HDAC3-207ENST00000475549 ABCB8Q9NUT2 735 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms