RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 EIF4HQ15056 248 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 E2F5Q15329 346 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 IL27RAQ6UWB1 636 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 GLRX5Q86SX6 157 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 RHBDD1Q8TEB9 315 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 PIWIL1Q96J94 861 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 HEXIM2Q96MH2 286 aaKnown RBP14.66□□□□□ -0.06
CCDC78-209ENST00000474647 ELOVL2Q9NXB9 296 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 USP3Q9Y6I4 520 aa14.66□□□□□ -0.06
CCDC78-209ENST00000474647 COL5A1P20908 1838 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 FLRT2O43155 660 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 F13A1P00488 732 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF883P0CG24 379 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ZSCAN22P10073 491 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 KRT13P13646 458 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 YWHAGP61981 247 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 BNC1Q01954 994 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 FNDC3BQ53EP0 1204 aaKnown RBP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 CCDC157Q569K6 752 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 INTS8Q75QN2 995 aaKnown RBP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 PDZD3Q86UT5 571 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ARHGAP18Q8N392 663 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF276Q8N554 614 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ZNF366Q8N895 744 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 TMEM174Q8WUU8 243 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 ARID3AQ99856 593 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 LHX5Q9H2C1 402 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 C6orf106Q9H6K1 298 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-209ENST00000474647 RAXQ9Y2V3 346 aa14.65□□□□□ -0.06
CCDC78-209ENST00000474647 URB1O60287 2271 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 TSPAN3O60637 253 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 IGLV3-19P01714 112 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 HSP90AA1P07900 732 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 ATXN1LP0C7T5 689 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 CSNK1EP49674 416 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 AFF3P51826 1226 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 TMEM215Q68D42 235 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 PIGZQ86VD9 579 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 MARCH9Q86YJ5 346 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 FAM186BQ8IYM0 893 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 OR2T3Q8NH03 318 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 CYB5D2Q8WUJ1 264 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 HNRNPLLQ8WVV9 542 aaKnown RBP14.64□□□□□ -0.07
CCDC78-209ENST00000474647 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 MAPK8IP1Q9UQF2 711 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 SLCO1B1Q9Y6L6 691 aa14.64□□□□□ -0.07
CCDC78-209ENST00000474647 A0A1B0GVL5 298 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 PFKFB1P16118 471 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 ACSL1P33121 698 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 TKTL1P51854 596 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 SLC8A3P57103 927 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 DNM1Q05193 864 aaKnown RBP14.63□□□□□ -0.07
CCDC78-209ENST00000474647 TEAD4Q15561 434 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 MPPE1Q53F39 396 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 LAYNQ6UX15 382 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 FMNL3Q8IVF7 1028 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 BAHD1Q8TBE0 780 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-209ENST00000474647 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
CCDC78-209ENST00000474647 CDC6Q99741 560 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 SLC2A11Q9BYW1 496 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 TOR4AQ9NXH8 423 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 KIAA1522Q9P206 1035 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-209ENST00000474647 CFAP45Q9UL16 551 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC78-209ENST00000474647 TRAF3IP3Q9Y228 551 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 BTBD3Q9Y2F9 522 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 SNX11Q9Y5W9 270 aa14.63□□□□□ -0.07
CCDC78-209ENST00000474647 TDRD6O60522 2096 aaKnown RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 MAPK13O15264 365 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 HOXD9P28356 352 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 HARS2P49590 506 aaKnown RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 SUZ12Q15022 739 aaKnown RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 KIF19Q2TAC6 998 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 GOLGA7BQ2TAP0 167 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 CHST9Q7L1S5 443 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 TMPRSS7Q7RTY8 843 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 ADAT2Q7Z6V5 191 aaKnown RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 SLC4A11Q8NBS3 891 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 RBBP8NLQ8NC74 664 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 C1orf216Q8TAB5 229 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 NDRG1Q92597 394 aaKnown RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 TMEM176AQ96HP8 235 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 LRIG1Q96JA1 1093 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 ULBP1Q9BZM6 244 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 TMEM8AQ9HCN3 771 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 CISHQ9NSE2 258 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 ABCB8Q9NUT2 735 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 SFMBT1Q9UHJ3 866 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 PLA2G4CQ9UP65 541 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-209ENST00000474647 PCDHGB2Q9Y5G2 931 aa14.62□□□□□ -0.07
CCDC78-209ENST00000474647 FAM149AA5PLN7 773 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 KCNK3O14649 394 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 TIMM44O43615 452 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 FSBPO95073 299 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 SEMA4FO95754 770 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 ZBED1O96006 694 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms