RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 GBE1Q04446 702 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 FPGSQ05932 587 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 XRCC4Q13426 336 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 RHBDF2Q6PJF5 856 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 B4GALNT4Q76KP1 1039 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 IQCKQ8N0W5 287 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 GIPC2Q8TF65 315 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 CASP10Q92851 521 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 TXLNGYQ9BZA5 131 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 BCLAF3A2AJT9 711 aaKnown RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 KCNN4O15554 427 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 CCR1P32246 355 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 HIBCHQ6NVY1 386 aaPredicted RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 CEP128Q6ZU80 1094 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 DDX53Q86TM3 631 aaKnown RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 BADQ92934 168 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 ANLNQ9NQW6 1124 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 OR12D3Q9UGF7 316 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 AFF4Q9UHB7 1163 aaKnown RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 NUDT5Q9UKK9 219 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 PCDHB12Q9Y5F1 795 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 KIAA1671Q9BY89 1806 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 FAM92AA1XBS5 289 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 H3BQF6 201 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 AGPSO00116 658 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 RARGP13631 454 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 RPL22P35268 128 aaKnown RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 TAF10Q12962 218 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 UAP1Q16222 522 aaPredicted RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 PDZD4Q76G19 769 aaPredicted RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 CEP295NLQ96MC4 621 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 CLSTN3Q9BQT9 956 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 ZBED2Q9BTP6 218 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 FOXP3Q9BZS1 431 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 OLA1Q9NTK5 396 aaKnown RBP20.48■□□□□ 0.87
SSR1-204ENST00000474597 ETNK2Q9NVF9 386 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 OSER1Q9NX31 292 aa20.48■□□□□ 0.87
SSR1-204ENST00000474597 SLC38A8A6NNN8 435 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 FAM72CH0Y354 149 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 TP73O15350 636 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 MSI1O43347 362 aaKnown RBP20.47■□□□□ 0.87
SSR1-204ENST00000474597 RBL1P28749 1068 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 HCAR3P49019 387 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 DPYSQ14117 519 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 MORF4L2Q15014 288 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 SLC45A4Q5BKX6 768 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 FAM72AQ5TYM5 149 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 FAM72DQ6L9T8 149 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 MSANTD2Q6P1R3 559 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 LRIG3Q6UXM1 1119 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 UBE2Q1Q7Z7E8 422 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 FAM72BQ86X60 149 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 VPS52Q8N1B4 723 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 ADAM7Q9H2U9 754 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 PABPC3Q9H361 631 aaKnown RBP20.47■□□□□ 0.87
SSR1-204ENST00000474597 ARHGEF38Q9NXL2 777 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 CLIC5Q9NZA1 410 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 DTLQ9NZJ0 730 aa20.47■□□□□ 0.87
SSR1-204ENST00000474597 MAGED2Q9UNF1 606 aaPredicted RBP20.47■□□□□ 0.87
SSR1-204ENST00000474597 HACD1B0YJ81 288 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 SYF2O95926 243 aaKnown RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 ERCC2P18074 760 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 CHKAP35790 457 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 SLC10A2Q12908 348 aaPredicted RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 SEMA3BQ13214 749 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 EIF4EBP2Q13542 120 aaPredicted RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 PPP2R5DQ14738 602 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 TPGS2Q68CL5 300 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 DENND2CQ68D51 928 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 FIBCD1Q8N539 461 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 ZNF461Q8TAF7 563 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 HAPLN3Q96S86 360 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 FERMT1Q9BQL6 677 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 OSBPL2Q9H1P3 480 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 PAK5Q9P286 719 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 MFHAS1Q9Y4C4 1052 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 ALPK3Q96L96 1907 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 I6L893 689 aaPredicted RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 MFSD11O43934 449 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 GJB5O95377 273 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 ATF6P18850 670 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 RNASEH2BQ5TBB1 312 aaKnown RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 HEATR6Q6AI08 1181 aaKnown RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 C16orf59Q7L2K0 433 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 PPIL6Q8IXY8 311 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 TFB1MQ8WVM0 346 aaKnown RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 SIK2Q9H0K1 926 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 USP29Q9HBJ7 922 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 MRPL17Q9NRX2 175 aaKnown RBP20.46■□□□□ 0.87
SSR1-204ENST00000474597 STK39Q9UEW8 545 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 SHOC2Q9UQ13 582 aa20.46■□□□□ 0.87
SSR1-204ENST00000474597 GOLGA6L10A6NI86 522 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 DCLK1O15075 740 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 SLC2A3P11169 496 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 DNAJB2P25686 324 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 EPHB2P29323 1055 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 BASP1P80723 227 aaKnown RBP20.45■□□□□ 0.86
SSR1-204ENST00000474597 IFFO1Q0D2I5 559 aa20.45■□□□□ 0.86
SSR1-204ENST00000474597 PAFAH1B3Q15102 231 aaKnown RBP20.45■□□□□ 0.86
SSR1-204ENST00000474597 TRMT10CQ7L0Y3 403 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms