RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 WDCPQ9H6R7 721 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 RCOR3Q9P2K3 495 aaPredicted RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 MRPL42Q9Y6G3 142 aaKnown RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 HMGB1P1B2RPK0 211 aaPredicted RBP18.62■□□□□ 0.57
VARS2-206ENST00000473916 SLC45A4Q5BKX6 768 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 ANKMY2Q8IV38 441 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 FUBP3Q96I24 572 aaKnown RBP eCLIP18.62■□□□□ 0.57
VARS2-206ENST00000473916 QKIQ96PU8 341 aaKnown RBP eCLIP18.62■□□□□ 0.57
VARS2-206ENST00000473916 CWH43Q9H720 699 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.62■□□□□ 0.57
VARS2-206ENST00000473916 MTMR11A4FU01 709 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 DCLK1O15075 740 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 TBC1D4O60343 1298 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 DGKIO75912 1065 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 CLTBP09497 229 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 ZFXP17010 805 aaPredicted RBP18.62■□□□□ 0.57
VARS2-206ENST00000473916 NR1D1P20393 614 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 IKBKEQ14164 716 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 BTBD8Q5XKL5 378 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 ZBED8Q8IZ13 594 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 RNF34Q969K3 372 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 TMEM175Q9BSA9 504 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 TSPYL1Q9H0U9 437 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 RRN3Q9NYV6 651 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 CTNNAL1Q9UBT7 734 aa18.62■□□□□ 0.57
VARS2-206ENST00000473916 XPO7Q9UIA9 1087 aaKnown RBP18.62■□□□□ 0.57
VARS2-206ENST00000473916 OR6C75A6NL08 312 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 F5H423 210 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 ERCC2P18074 760 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 MAGOHP61326 146 aaKnown RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 IFI35P80217 286 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 DEFB103AP81534 67 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 PDIA2Q13087 525 aaKnown RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 EIF4EBP2Q13542 120 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 KCNJ11Q14654 390 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 CNKSR3Q6P9H4 555 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 RELL1Q8IUW5 271 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 NUP93Q8N1F7 819 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 NPWQ8N729 165 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 C8orf48Q96LL4 319 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 SEPT5Q99719 369 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 TTPALQ9BTX7 342 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 CEP41Q9BYV8 373 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 RAB6BQ9NRW1 208 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 GMIPQ9P107 970 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 PTPRSQ13332 1948 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 TRIM43BA6NCK2 446 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 FOXO6A8MYZ6 492 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 IRAK2O43187 625 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 F9P00740 461 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 GJA8P48165 433 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 NR2C2P49116 596 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 TPI1P60174 286 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 HIF1AQ16665 826 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 AGBL2Q5U5Z8 902 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 FBXO46Q6PJ61 603 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 VSTM1Q6UX27 236 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 HOOK3Q86VS8 718 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 CDKL3Q8IVW4 592 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 TRIM43Q96BQ3 446 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 PRDM5Q9NQX1 630 aaPredicted RBP18.61■□□□□ 0.57
VARS2-206ENST00000473916 ABCC13Q9NSE7 274 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 OR12D3Q9UGF7 316 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 CDY1Q9Y6F8 540 aa18.61■□□□□ 0.57
VARS2-206ENST00000473916 TRIM66O15016 1216 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 PARNO95453 639 aaKnown RBP18.6■□□□□ 0.57
VARS2-206ENST00000473916 METTL18O95568 372 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 CSF2RAP15509 400 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 XRCC4Q13426 336 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 MGAT5BQ3V5L5 792 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 PCGF5Q86SE9 256 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 TLCD1Q96CP7 247 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 SMOC2Q9H3U7 446 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 SCML2Q9UQR0 700 aa18.6■□□□□ 0.57
VARS2-206ENST00000473916 CFAP69A5D8W1 941 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 C2CD2LO14523 706 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 RASGRF2O14827 1237 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 AVILO75366 819 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 LRIG2O94898 1065 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 MAGEA11P43364 429 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 AIF1P55008 147 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 DUSP4Q13115 394 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 GPR17Q13304 367 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 AUHQ13825 339 aaKnown RBP18.59■□□□□ 0.57
VARS2-206ENST00000473916 ARL13BQ3SXY8 428 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 TFB1MQ8WVM0 346 aaKnown RBP18.59■□□□□ 0.57
VARS2-206ENST00000473916 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 SIK2Q9H0K1 926 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 C11orf49Q9H6J7 331 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 ETNK1Q9HBU6 452 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 PAK5Q9P286 719 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.59■□□□□ 0.57
VARS2-206ENST00000473916 EFEMP2O95967 443 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 ALDH7A1P49419 539 aaKnown RBP18.59■□□□□ 0.57
VARS2-206ENST00000473916 AP1B1Q10567 949 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 PAFAH1B3Q15102 231 aaKnown RBP18.59■□□□□ 0.57
VARS2-206ENST00000473916 CCDC38Q502W7 563 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 KDM7AQ6ZMT4 941 aa18.59■□□□□ 0.57
VARS2-206ENST00000473916 CENPUQ71F23 418 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 859.5 ms