RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 RUNDC3BQ96NL0 473 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PRDM14Q9GZV8 571 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 C17orf75Q9HAS0 396 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PRR13Q9NZ81 148 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 EPS15L1Q9UBC2 864 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FBXL21Q9UKT6 434 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 VANGL2Q9ULK5 521 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PLAGL2Q9UPG8 496 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 LZTS1Q9Y250 596 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SPEF1Q9Y4P9 236 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PCDHB6Q9Y5E3 794 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CNTNAP4Q9C0A0 1308 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MYH10P35580 1976 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 IRS4O14654 1257 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CLOCKO15516 846 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PDE8AO60658 829 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SPAG7O75391 227 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SEC24DO94855 1032 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CBX6O95503 412 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PRKACAP17612 351 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 P2RX3P56373 397 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TFAP4Q01664 338 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 GBE1Q04446 702 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FOLH1Q04609 750 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 C10orf76Q5T2E6 689 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SLX4IPQ5VYV7 408 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PPP4R4Q6NUP7 873 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 POMZP3Q6PJE2 187 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 IDO2Q6ZQW0 420 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 LRRC6Q86X45 466 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DCP2Q8IU60 420 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TOP6BLQ8N6T0 577 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ACTRT2Q8TDY3 377 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MEGF10Q96KG7 1140 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CEP19Q96LK0 163 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SERPINB12Q96P63 405 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 COQ7Q99807 217 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FERMT1Q9BQL6 677 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 IER2Q9BTL4 223 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FSD1Q9BTV5 496 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DUSP23Q9BVJ7 150 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TDRD1Q9BXT4 1180 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RNF38Q9H0F5 515 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ARMC7Q9H6L4 198 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SIAEQ9HAT2 523 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 UBN1Q9NPG3 1134 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 NKIRAS1Q9NYS0 192 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CDH7Q9ULB5 785 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 RBMX2Q9Y388 322 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 A0A0B4J203 849 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM95CA0A1B0GW59 222 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 XPO1O14980 1071 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 SCO2O43819 266 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 LRRN2O75325 713 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 GPC4O75487 556 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ZBTB11O95625 1053 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CYP21A2P08686 494 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CALM1P0DP23 149 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CALM2P0DP24 149 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CALM3P0DP25 149 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TAC1P20366 129 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 JAK1P23458 1154 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 STT3AP46977 705 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DRG2P55039 364 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 POLR2FP61218 127 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 GFPT1Q06210 699 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 KYNUQ16719 465 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TXNRD1Q16881 649 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CCDC58Q4VC31 144 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 TAF1BQ53T94 588 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PPP6R3Q5H9R7 873 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CYP4A22Q5TCH4 519 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FIP1L1Q6UN15 594 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 VSTM1Q6UX27 236 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 GPR141Q7Z602 305 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 DHDDSQ86SQ9 333 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ANKRD53Q8N9V6 530 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 U2AF1L4Q8WU68 220 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM172AQ8WUF8 416 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MTMR8Q96EF0 704 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 LRGUKQ96M69 825 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 UROC1Q96N76 676 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF641Q96N77 438 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 CALN1Q9BXU9 219 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 LRRC4CQ9HCJ2 640 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 C8orf4Q9NR00 106 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PCDHA12Q9UN75 941 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 PCDHGA3Q9Y5H0 932 aa5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 MAP2P11137 1827 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-206ENST00000473684 NFAT5O94916 1531 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 SSU72P8A0A1W2PR75 194 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM172BPA6NC97 362 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 BTBD11A6QL63 1104 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 BTBD18B2RXH4 712 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 KCNQ2O43526 872 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CSDE1O75534 798 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 C6orf222P0C671 652 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 EEF2P13639 858 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CYP7A1P22680 504 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms