RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 TPGS2Q68CL5 300 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 STRADAQ7RTN6 431 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 AUTS2Q8WXX7 1259 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 SPATA17Q96L03 361 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
LMNA-213ENST00000473598 NAP1L3Q99457 506 aaPredicted RBP15.35■□□□□ 0.05
LMNA-213ENST00000473598 NPY6RQ99463 290 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 NOD2Q9HC29 1040 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 AFF4Q9UHB7 1163 aaKnown RBP15.35■□□□□ 0.05
LMNA-213ENST00000473598 NAALADL1Q9UQQ1 740 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 COL6A3P12111 3177 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 BHMG1C9JSJ3 638 aaPredicted RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 LILRB3O75022 631 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SOAT2O75908 522 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 CTSAP10619 480 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 CTNNB1P35222 781 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 BMPR1AP36894 532 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SULT1E1P49888 294 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 PAPOLAP51003 745 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 RPL10AP62906 217 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 CYP4V2Q6ZWL3 525 aaPredicted RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 EIF1ADQ8N9N8 165 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 CASKIN2Q8WXE0 1202 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 RBM41Q96IZ5 413 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 PEBP4Q96S96 227 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 TBCBQ99426 244 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 DDX47Q9H0S4 455 aaKnown RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 FBXO44Q9H4M3 255 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SLITRK6Q9H5Y7 841 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.34■□□□□ 0.054e-6■□□□□ 8.2
LMNA-213ENST00000473598 IL37Q9NZH6 218 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 FNIP2Q9P278 1114 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 HSFX1Q9UBD0 423 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 NFU1Q9UMS0 254 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SSX2IPQ9Y2D8 614 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 RWDD3Q9Y3V2 267 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 XIRP2A4UGR9 3374 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 PDLIM1O00151 329 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 PRPSAP2O60256 369 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ENDOD1O94919 500 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 CSPG5O95196 566 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 KRT1P04264 644 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 NCAM1P13591 858 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ATF2P15336 505 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ERVK-21P61565 698 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 CREMQ03060 361 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 BLMHQ13867 455 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 RAB33AQ14088 237 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SETDB1Q15047 1291 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ACCSLQ4AC99 568 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 KCNT1Q5JUK3 1230 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ZFYVE27Q5T4F4 411 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 ZNF697Q5TEC3 545 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 THEMIS2Q5TEJ8 643 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 BEND5Q7L4P6 421 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SLC13A5Q86YT5 568 aaPredicted RBP15.34■□□□□ 0.05
LMNA-213ENST00000473598 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 IFT81Q8WYA0 676 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 TRIM62Q9BVG3 475 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 KLHL11Q9NVR0 708 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SCML2Q9UQR0 700 aa15.34■□□□□ 0.05
LMNA-213ENST00000473598 SPTBN5Q9NRC6 3674 aaKnown RBP15.33■□□□□ 0.05
LMNA-213ENST00000473598 A6NHS1 94 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 RARAP10276 462 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 TUFMP49411 452 aaKnown RBP15.33■□□□□ 0.04
LMNA-213ENST00000473598 USP46P62068 366 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 TRADDQ15628 312 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 OTUD1Q5VV17 481 aaPredicted RBP15.33■□□□□ 0.04
LMNA-213ENST00000473598 SCYL2Q6P3W7 929 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 GPR152Q8TDT2 470 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 GDPD5Q8WTR4 605 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.33■□□□□ 0.04
LMNA-213ENST00000473598 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
LMNA-213ENST00000473598 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
LMNA-213ENST00000473598 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 SLITRK1Q96PX8 696 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 PRDM12Q9H4Q4 367 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 COMMD8Q9NX08 183 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 RRN3Q9NYV6 651 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 LMCD1Q9NZU5 365 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 FAM92AA1XBS5 289 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 M0QYT0 321 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 SEC24AO95486 1093 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 ATF6P18850 670 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 CETN2P41208 172 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 SCTRP47872 440 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 COPS2P61201 443 aa15.33■□□□□ 0.04
LMNA-213ENST00000473598 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
LMNA-213ENST00000473598 PITX1P78337 314 aaPredicted RBP15.33■□□□□ 0.04
LMNA-213ENST00000473598 BOLA3Q53S33 107 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms