RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	CCDC196	A0A1B0GTZ2	297 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	FAM90A20P	A6NIJ5	464 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	SAC3D1	A6NKF1	404 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	KIF28P	B7ZC32	967 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	EYA2	O00167	538 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	SEPT4	O43236	478 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	CYP3A4	P08684	503 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	NR2F6	P10588	404 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	PDE1A	P54750	535 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	RBM6	P78332	1123 aa	Known RBP	5.28	□□□□□ -1.56
BBX-223	ENST00000473542	TXNL4A	P83876	142 aa	Known RBP	5.28	□□□□□ -1.56
BBX-223	ENST00000473542	E2F1	Q01094	437 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	TLE3	Q04726	772 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	UBE3A	Q05086	875 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	CBFB	Q13951	182 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	FAM187B	Q17R55	369 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	P3H1	Q32P28	736 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	GALNTL6	Q49A17	601 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	AARS2	Q5JTZ9	985 aa	Known RBP	5.28	□□□□□ -1.56
BBX-223	ENST00000473542	ACSM6	Q6P461	480 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	RD3	Q7Z3Z2	195 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	TMTC1	Q8IUR5	882 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	CPO	Q8IVL8	374 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	SLC2A12	Q8TD20	617 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	ASB12	Q8WXK4	309 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	REXO5	Q96IC2	774 aa	Known RBP	5.28	□□□□□ -1.56
BBX-223	ENST00000473542	MPP4	Q96JB8	637 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	NPAS1	Q99742	590 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	THAP7	Q9BT49	309 aa	Predicted RBP	5.28	□□□□□ -1.56
BBX-223	ENST00000473542	CCDC134	Q9H6E4	229 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	DLL3	Q9NYJ7	618 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	CRYL1	Q9Y2S2	319 aa		5.28	□□□□□ -1.56
BBX-223	ENST00000473542	HNRNPR	O43390	633 aa	Known RBP	5.27	□□□□□ -1.57
BBX-223	ENST00000473542	TTLL1	O95922	423 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	NPS	P0C0P6	89 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	MPL	P40238	635 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	SEC24C	P53992	1094 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	KRTAP10-9	P60411	292 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	MRPS35	P82673	323 aa	Known RBP	5.27	□□□□□ -1.57
BBX-223	ENST00000473542	CHRND	Q07001	517 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	DCTN1	Q14203	1278 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	ANKRD1	Q15327	319 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	MAPRE1	Q15691	268 aa	Known RBP	5.27	□□□□□ -1.57
BBX-223	ENST00000473542	CTXN3	Q4LDR2	81 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	RRAGA	Q7L523	313 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	ZNF804A	Q7Z570	1209 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	P3H2	Q8IVL5	708 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	OR52L2P	Q8NGH6	319 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	TFAP2B	Q92481	460 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	TBC1D5	Q92609	795 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	NPIPB3	Q92617	1050 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	GOLGA1	Q92805	767 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	MAEL	Q96JY0	434 aa	Known RBP	5.27	□□□□□ -1.57
BBX-223	ENST00000473542	TWNK	Q96RR1	684 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	RNF26	Q9BY78	433 aa	Predicted RBP	5.27	□□□□□ -1.57
BBX-223	ENST00000473542	TMEM160	Q9NX00	188 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	BAG5	Q9UL15	447 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	COX11	Q9Y6N1	276 aa		5.27	□□□□□ -1.57
BBX-223	ENST00000473542	CCDC187	A0A096LP49	1063 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	C3orf70	A6NLC5	250 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542		J3KRW8	73 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	AP4M1	O00189	453 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CES2	O00748	559 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	TSPAN3	O60637	253 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	JUP	P14923	745 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	NDUFB7	P17568	137 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	XBP1	P17861	261 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	DUSP1	P28562	367 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CD38	P28907	300 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CYP2C18	P33260	490 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	IGHMBP2	P38935	993 aa	Known RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	PLA2G5	P39877	138 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	DEUP1	Q05D60	604 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CCDC15	Q0P6D6	951 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	TRPC3	Q13507	836 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	BFSP2	Q13515	415 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	PAPD7	Q5XG87	772 aa	Known RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	FBXO42	Q6P3S6	717 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	DPY19L3	Q6ZPD9	716 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	PEG10	Q86TG7	708 aa	Known RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	LINC01465	Q8N7H1	131 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	C12orf76	Q8N812	135 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CSGALNACT1	Q8TDX6	532 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	KTI12	Q96EK9	354 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	MCRS1	Q96EZ8	462 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	PDLIM2	Q96JY6	352 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	COG8	Q96MW5	612 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	SNX18	Q96RF0	628 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	MECR	Q9BV79	373 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	GGA3	Q9NZ52	723 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	LRIT1	Q9P2V4	623 aa		5.26	□□□□□ -1.57
BBX-223	ENST00000473542	CCNL1	Q9UK58	526 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.26	□□□□□ -1.57
BBX-223	ENST00000473542	SPATA31A1	Q5TZJ5	1347 aa		5.25	□□□□□ -1.57
BBX-223	ENST00000473542	SPATA31A6	Q5VVP1	1343 aa		5.25	□□□□□ -1.57
BBX-223	ENST00000473542		H0YIZ8	118 aa		5.25	□□□□□ -1.57
BBX-223	ENST00000473542	INO80B-WBP1	J3KQ70	363 aa		5.25	□□□□□ -1.57
BBX-223	ENST00000473542		M0QZQ0	153 aa		5.25	□□□□□ -1.57
BBX-223	ENST00000473542	QSOX1	O00391	747 aa		5.25	□□□□□ -1.57

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