RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DSG1Q02413 1049 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 CDK18Q07002 472 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 BOLA3Q53S33 107 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 SLC9A4Q6AI14 798 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 PYROXD2Q8N2H3 581 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 MCUQ8NE86 351 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 DPEP3Q9H4B8 488 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 DDX43Q9NXZ2 648 aaKnown RBP21.79■■□□□ 1.08
COL18A1-207ENST00000473212 ITM2AO43736 263 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 ZNF286BP0CG31 522 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 MAGEA3P43357 314 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 TBCCQ15814 346 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 FASTKD1Q53R41 847 aaKnown RBP21.78■■□□□ 1.08
COL18A1-207ENST00000473212 CWF19L1Q69YN2 538 aaKnown RBP21.78■■□□□ 1.08
COL18A1-207ENST00000473212 ATG14Q6ZNE5 492 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 GSTCDQ8NEC7 633 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 ECSITQ9BQ95 431 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 NT5C1AQ9BXI3 368 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 DHX35Q9H5Z1 703 aaKnown RBP21.78■■□□□ 1.08
COL18A1-207ENST00000473212 NRDE2Q9H7Z3 1164 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 TMPRSS4Q9NRS4 437 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 SNX9Q9Y5X1 595 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 SDC4P31431 198 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 SARNPP82979 210 aaKnown RBP21.78■■□□□ 1.08
COL18A1-207ENST00000473212 SLC25A3Q00325 362 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 INCA1Q0VD86 236 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 GALNT15Q8N3T1 639 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 ZNF778Q96MU6 729 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 PCDHA11Q9Y5I1 949 aa21.78■■□□□ 1.08
COL18A1-207ENST00000473212 A0A088AWK7 358 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 ADM5C9JUS6 153 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 HBP1O60381 514 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 CPOXP36551 454 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 POLE2P56282 527 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 RPL10AP62906 217 aaKnown RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 GSTA3Q16772 222 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 GLRA4Q5JXX5 417 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 ARCQ7LC44 396 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 NDRG1Q92597 394 aaKnown RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 KIF12Q96FN5 646 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 C1orf21Q9H246 121 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 SMARCAD1Q9H4L7 1026 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 CYP3A43Q9HB55 503 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 PRMT7Q9NVM4 692 aaPredicted RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 GPRC5DQ9NZD1 345 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 GINS2Q9Y248 185 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 DNAJC16Q9Y2G8 782 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 HES2Q9Y543 173 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 CITO14578 2027 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 GSRP00390 522 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 LYNP07948 512 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 PHKA2P46019 1235 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 ROR2Q01974 943 aaKnown RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 DENND5BQ6ZUT9 1274 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 POU5F2Q8N7G0 328 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 C7orf31Q8N865 590 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 ZMAT2Q96NC0 199 aaKnown RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 TRAPPC9Q96Q05 1148 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 NR1H4Q96RI1 486 aaPredicted RBP21.77■■□□□ 1.08
COL18A1-207ENST00000473212 SOX13Q9UN79 622 aa21.77■■□□□ 1.08
COL18A1-207ENST00000473212 ZNF638Q14966 1978 aaKnown RBP21.77■■□□□ 1.07
COL18A1-207ENST00000473212 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.76■■□□□ 1.07
COL18A1-207ENST00000473212 ARHGAP42A6NI28 874 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 AOC1P19801 751 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 BAG6P46379 1132 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 SERPINB9P50453 376 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 PDE1BQ01064 536 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 OLIG2Q13516 323 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 KCNT2Q6UVM3 1135 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 CCDC185Q8N715 623 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 VRTNQ9H8Y1 702 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 RBPJLQ9UBG7 517 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 GJD2Q9UKL4 321 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 MCF2P10911 925 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 KCNA4P22459 653 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 TMEM62Q0P6H9 643 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 CDC16Q13042 620 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 TUBB3Q13509 450 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 BSPRYQ5W0U4 402 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 KYAT3Q6YP21 454 aaKnown RBP21.76■■□□□ 1.07
COL18A1-207ENST00000473212 WDR75Q8IWA0 830 aaKnown RBP21.76■■□□□ 1.07
COL18A1-207ENST00000473212 GPAMQ9HCL2 828 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 PDP2Q9P2J9 529 aa21.76■■□□□ 1.07
COL18A1-207ENST00000473212 WDR27A2RRH5 827 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 VAV1P15498 845 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 CRABP2P29373 138 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 ATICP31939 592 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 L1CAMP32004 1257 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 SLC6A3Q01959 620 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 HIC1Q14526 733 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 SOWAHAQ2M3V2 549 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 PKDCCQ504Y2 493 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 TMCO4Q5TGY1 634 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 AP1ARQ63HQ0 302 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 MBLAC2Q68D91 279 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 SMYD5Q6GMV2 418 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 RAPH1Q70E73 1250 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 CDKL3Q8IVW4 592 aaPredicted RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 MFN1Q8IWA4 741 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 PIWIL2Q8TC59 973 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms