RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 ZSWIM2Q8NEG5 633 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 ZNF384Q8TF68 577 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 LINC01599Q8WXQ3 324 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 KIFAP3Q92845 792 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 SLCO2A1Q92959 643 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 STAMBPL1Q96FJ0 436 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC120Q96HB5 630 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 FCRL2Q96LA5 508 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 MTMR9Q96QG7 549 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 IWS1Q96ST2 819 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 PSMB7Q99436 277 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 ELAC2Q9BQ52 826 aaKnown RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 IER2Q9BTL4 223 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 G6PC3Q9BUM1 346 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 CDADC1Q9BWV3 514 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 PITPNM3Q9BZ71 974 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 MMADHCQ9H3L0 296 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 ABHD16BQ9H3Z7 469 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 DCP1AQ9NPI6 582 aaPredicted RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 NLRC4Q9NPP4 1024 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 TMEM260Q9NX78 707 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 MCM9Q9NXL9 1143 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 IL1RAPL1Q9NZN1 696 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 SLAMF8Q9P0V8 285 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 PDP2Q9P2J9 529 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 SEL1LQ9UBV2 794 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 SERPINB13Q9UIV8 391 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 KCNG1Q9UIX4 513 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 SMG5Q9UPR3 1016 aaKnown RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 TMA7Q9Y2S6 64 aaKnown RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 MRPL42Q9Y6G3 142 aaKnown RBP5.14□□□□□ -1.59
LRCH3-214ENST00000473177 USH1CQ9Y6N9 552 aa5.14□□□□□ -1.59
LRCH3-214ENST00000473177 MYH13Q9UKX3 1938 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 COL4A6Q14031 1691 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 DNAJC25-GNG10A0A024R161 153 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC163A0A0D9SF12 145 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC189A1A4V9 331 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 LINC01553A4QN01 128 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 MYMKA6NI61 221 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 IPO5O00410 1097 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 EIF3DO15371 548 aaKnown RBP eCLIP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 ADCY6O43306 1168 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CDH16O75309 829 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TBCAO75347 108 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 NPTXRO95502 500 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SNAI1O95863 264 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SNRPB2P08579 225 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 ZGLP1P0C6A0 271 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TROVE2P10155 538 aaKnown RBP eCLIP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 PABPC1P11940 636 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 GZMAP12544 262 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 KRT13P13646 458 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCNB1P14635 433 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 ATP6V1C1P21283 382 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SCP2P22307 547 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 NR2F2P24468 414 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TMOD1P28289 359 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SOX5P35711 763 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 STAT3P40763 770 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 NBL1P41271 181 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SEPHS1P49903 392 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 PAPOLAP51003 745 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 PLTPP55058 493 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 WDR5P61964 334 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 GPC5P78333 572 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SIGLEC14Q08ET2 396 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 COASYQ13057 564 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 DUSP4Q13115 394 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 PLCL1Q15111 1095 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TESK1Q15569 626 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SF1Q15637 639 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SMAD2Q15796 467 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC6Q16204 474 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 GSTA3Q16772 222 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 ST3GAL2Q16842 350 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 GALNTL6Q49A17 601 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TCEAL5Q5H9L2 206 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 RALGPS1Q5JS13 557 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SLC35F1Q5T1Q4 408 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 GPATCH4Q5T3I0 446 aaKnown RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 YOD1Q5VVQ6 348 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 IRGCQ6NXR0 463 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 MAMDC4Q6UXC1 1216 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CYP2R1Q6VVX0 501 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 NSMFQ6X4W1 530 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 ARMCX2Q7L311 632 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 IRF2BP2Q7Z5L9 587 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TMCO2Q7Z6W1 182 aaPredicted RBP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SCUBE1Q8IWY4 988 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC105Q8IYK2 499 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 CCDC89Q8N998 374 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 FAM133AQ8N9E0 248 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TMEM145Q8NBT3 493 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 KIAA0895Q8NCT3 520 aa5.13□□□□□ -1.59
LRCH3-214ENST00000473177 TBCKQ8TEA7 893 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms