RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NFATC3Q12968 1075 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PTP4A2Q12974 167 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 EIF2B5Q13144 721 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 KCNB1Q14721 858 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 UBXN2BQ14CS0 331 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PPP2R5BQ15173 497 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 MPP7Q5T2T1 576 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TMEM198Q66K66 360 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 RGS7BPQ6MZT1 257 aaPredicted RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 NUP54Q7Z3B4 507 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 LDHDQ86WU2 507 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TAGAPQ8N103 731 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ADSSL1Q8N142 457 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 CFAP52Q8N1V2 620 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PABPC5Q96DU9 382 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 KIF1BPQ96EK5 621 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ELMOD3Q96FG2 381 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 VMP1Q96GC9 406 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 FER1L6-AS2Q96M78 137 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 KLHL15Q96M94 604 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TIGD1Q96MW7 591 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 LENG8Q96PV6 779 aaPredicted RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 AGAP2Q99490 1192 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 STRA6Q9BX79 667 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 GPR35Q9HC97 309 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 SLC25A10Q9UBX3 287 aaPredicted RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 TMCC3Q9ULS5 477 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PLEKHM1Q9Y4G2 1056 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TRPV2Q9Y5S1 764 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ZC3H13Q5T200 1668 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 ITSN2Q9NZM3 1697 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ABCA6Q8N139 1617 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TMEM265A0A087WTH1 108 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 C17orf100A8MU93 164 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 GTPBP1O00178 669 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 GRM8O00222 908 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 LEFTY2O00292 366 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ZNF185O15231 689 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 DYRK3O43781 588 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 WEE2P0C1S8 567 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 FOSL1P15407 271 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PFKLP17858 780 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 CRHR1P34998 444 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 UFM1P61960 85 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 EIF4HQ15056 248 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 BAK1Q16611 211 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 RNF151Q2KHN1 245 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 SLC44A4Q53GD3 710 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ATPAF1Q5TC12 328 aaPredicted RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 ALKBH5Q6P6C2 394 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 ZCCHC12Q6PEW1 402 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 GLRX5Q86SX6 157 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ANKRD35Q8N283 1001 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 IL17RCQ8NAC3 791 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 PDZD8Q8NEN9 1154 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 OR8H1Q8NGG4 311 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 MOSPD2Q8NHP6 518 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 CPT1BQ92523 772 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 TBC1D5Q92609 795 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 SLC22A18Q96BI1 424 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 ZBTB8AQ96BR9 441 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 CYFIP2Q96F07 1278 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 RBM15Q96T37 977 aaKnown RBP eCLIP2.88□□□□□ -1.95
XRN1-210ENST00000472697 UNKLQ9H9P5 680 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 ETAA1Q9NY74 926 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 JKAMPQ9P055 326 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 HSFX1Q9UBD0 423 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 RIMKLBQ9ULI2 386 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 KCNE2Q9Y6J6 123 aa2.88□□□□□ -1.95
XRN1-210ENST00000472697 KDM5AP29375 1690 aaKnown RBP2.88□□□□□ -1.95
XRN1-210ENST00000472697 UNC13BO14795 1591 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 A0A1B0GTL3 188 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 SMIM30A4D0T7 59 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 GTPBP10A4D1E9 387 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 C9orf172C9J069 976 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 F5H0A9 414 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 MATN2O00339 956 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 POLRMTO00411 1230 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 PIK3R2O00459 728 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PHF2O75151 1096 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 HAUS5O94927 633 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 RHOP08100 348 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 HK1P19367 917 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PRKCHP24723 683 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 MCM3P25205 808 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 VIPR1P32241 457 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ATP6V1E1P36543 226 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 RCAN1P53805 252 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 POU6F2P78424 691 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 BFSP2Q13515 415 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 DCTN1Q14203 1278 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PSMD6Q15008 389 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 KYNUQ16719 465 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 CCDC178Q5BJE1 867 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ZNF648Q5T619 568 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 SLC9A4Q6AI14 798 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 BRINP3Q76B58 766 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ADGRG6Q86SQ4 1221 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 EPHX4Q8IUS5 362 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 VPS52Q8N1B4 723 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms