RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PNLIPRP1P54315 467 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 AP2B1P63010 937 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 TIAL1Q01085 375 aaKnown RBP eCLIP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 MAP2K1Q02750 393 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 FPGSQ05932 587 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 EFEMP1Q12805 493 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 TAF12Q16514 161 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 ADCK5Q3MIX3 580 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 MOGAT3Q86VF5 341 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 SLC44A2Q8IWA5 706 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 NRSN1Q8IZ57 195 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 ABHD5Q8WTS1 349 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 TMEM125Q96AQ2 219 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 GRAMD1AQ96CP6 724 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 NUDT22Q9BRQ3 303 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 TEX101Q9BY14 249 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 TAF1DQ9H5J8 278 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 KIF17Q9P2E2 1029 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 PNMA2Q9UL42 364 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 SSX2IPQ9Y2D8 614 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-204ENST00000471245 COL15A1P39059 1388 aa6.42□□□□□ -1.38
CKS1B-204ENST00000471245 BCORQ6W2J9 1755 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 RRN3P2A6NIE6 340 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 DHHO43323 396 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 ANXA6P08133 673 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 HSP90AB1P08238 724 aaKnown RBP6.41□□□□□ -1.38
CKS1B-204ENST00000471245 ACRV1P26436 265 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 PRKAR1BP31321 381 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 ADD2P35612 726 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 DDIT3P35638 169 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 PGDP52209 483 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 VAV2P52735 878 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 TBX2Q13207 712 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-204ENST00000471245 GEN1Q17RS7 908 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 TRIM60Q495X7 471 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 CD300EQ496F6 205 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-204ENST00000471245 RABL3Q5HYI8 236 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 VPS53Q5VIR6 699 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 CCDC117Q8IWD4 279 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-204ENST00000471245 COLGALT2Q8IYK4 626 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 NAXEQ8NCW5 288 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 OR1N1Q8NGS0 311 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 RUBCNQ92622 972 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 WWC2-AS2Q96NR7 200 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 WDR24Q96S15 920 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 C1QTNF3Q9BXJ4 246 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 TAOK3Q9H2K8 898 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 MLXIPQ9HAP2 919 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 GBA2Q9HCG7 927 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-204ENST00000471245 GALNT9Q9HCQ5 603 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 CD248Q9HCU0 757 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 LPAR3Q9UBY5 353 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 NARFQ9UHQ1 456 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 NOX1Q9Y5S8 564 aa6.41□□□□□ -1.38
CKS1B-204ENST00000471245 USP1O94782 785 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 AGR2O95994 175 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 SRGAP2BP0DMP2 458 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 HGFP14210 728 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 RBL1P28749 1068 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 EPHA3P29320 983 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 UQCRC1P31930 480 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 TOB2Q14106 344 aaPredicted RBP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 EIF4A2Q14240 407 aaKnown RBP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 ICAM4Q14773 271 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 CLCA4Q14CN2 919 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 ATPAF1Q5TC12 328 aaPredicted RBP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 TICAM2Q86XR7 235 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 DNAJC10Q8IXB1 793 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 FUBP1Q96AE4 644 aaKnown RBP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 NACC2Q96BF6 587 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 FAM136AQ96C01 138 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 SDCCAG3Q96C92 435 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 RNF31Q96EP0 1072 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 PPM1MQ96MI6 270 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
CKS1B-204ENST00000471245 AKIP1Q9NQ31 210 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 INTS13Q9NVM9 706 aa6.4□□□□□ -1.38
CKS1B-204ENST00000471245 PRRT4C9JH25 899 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ADM5C9JUS6 153 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 DNPH1O43598 174 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SNX2O60749 519 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 CYP19A1P11511 503 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 EPHX2P34913 555 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ZEB1P37275 1124 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SELENOPP49908 381 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 MTHFSP49914 203 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 PAPOLAP51003 745 aaKnown RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SCAPQ12770 1279 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 MAPRE1Q15691 268 aaKnown RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SPATS1Q496A3 300 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 PLEKHO1Q53GL0 409 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 INTS11Q5TA45 600 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms