RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CCDC130P13994 396 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 TYRP14679 529 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 WASP42768 502 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 ATRXP46100 2492 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PGFP49763 221 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 FAM193AP78312 1265 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 BIRC3Q13489 604 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 NCOA4Q13772 614 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 FIGNQ5HY92 759 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 SDE2Q6IQ49 451 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 KLHDC10Q6PID8 442 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 SCARA5Q6ZMJ2 495 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 TMC6Q7Z403 805 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 RAB44Q7Z6P3 723 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 ACOT1Q86TX2 421 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 FBXL13Q8NEE6 735 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 SLC2A14Q8TDB8 520 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PDLIM2Q96JY6 352 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 HSPA12BQ96MM6 686 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 FAM124BQ9H5Z6 455 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PNPLA8Q9NP80 782 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PLCB1Q9NQ66 1216 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 IMPACTQ9P2X3 320 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 LSM7Q9UK45 103 aaKnown RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 ZFYVE26Q68DK2 2539 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PCNX2A6NKB5 2137 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 PI4KAP42356 2102 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 CACNA1EQ15878 2313 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 HHLA1C9JL84 531 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 ABCB7O75027 752 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TBX18O95935 607 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TPM1P09493 284 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 CISD3P0C7P0 127 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 P4HA1P13674 534 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TRIM21P19474 475 aaKnown RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 PON1P27169 355 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 ATP5C1P36542 298 aaKnown RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 DGKGP49619 791 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 MAP3K7CLP57077 242 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 RING1Q06587 406 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TRIM65Q6PJ69 517 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 Q6ZNB5 142 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TOGARAM2Q6ZUX3 1019 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 PROSER1Q86XN7 944 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 ZNF276Q8N554 614 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 DEFB119Q8N690 84 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 CCDC150Q8NCX0 1101 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 NEK11Q8NG66 645 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 OR2I1PQ8NGU4 316 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 TAF4BQ92750 862 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 MRGPRX1Q96LB2 322 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 CRACR2AQ9BSW2 395 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 EDEM3Q9BZQ6 932 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 IMPG2Q9BZV3 1241 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■■■ 100.6
SF3A1-206ENST00000471037 OSER1Q9NX31 292 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 RAB20Q9NX57 234 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 HMGXB4Q9UGU5 601 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 FBXO10Q9UK96 956 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 SCML2Q9UQR0 700 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
SF3A1-206ENST00000471037 BAHCC1Q9P281 2608 aa9.51□□□□□ -0.89
SF3A1-206ENST00000471037 CEP192Q8TEP8 1941 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 A0A1W2PQJ5 194 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 NPC1O15118 1278 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CYP26A1O43174 497 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 NDUFS2O75306 463 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CLSTN1O94985 981 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 HLA-DRAP01903 254 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 FAM200BP0CF97 657 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 GNSP15586 552 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ASPAP45381 313 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 PLA2G4AP47712 749 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 PSEN1P49768 467 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ZNF132P52740 706 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 NDST1P52848 882 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 GSDMDP57764 484 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 INCA1Q0VD86 236 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 TBX2Q13207 712 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ENPP2Q13822 863 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 TRIP6Q15654 476 aaKnown RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 SGSM1Q2NKQ1 1148 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 PLEKHG6Q3KR16 790 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 WDR45BQ5MNZ6 344 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 SYCP2LQ5T4T6 812 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms