RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 PSEN2P49810 448 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 ZNF200P98182 395 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 C16orf72Q14CZ0 275 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 TAF5Q15542 800 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 SV2CQ496J9 727 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 CDCA2Q69YH5 1023 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 ADGRF2Q8IZF7 708 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 CILPO75339 1184 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 PRKACBP22694 351 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 RNF19BQ6ZMZ0 732 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 PCDH9Q9HC56 1237 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 I3L4J1 428 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 MORF4L2Q15014 288 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 CCDC14Q49A88 953 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 PDZD4Q76G19 769 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 SIK2Q9H0K1 926 aa17.04■□□□□ 0.32
HOXB3-205ENST00000470495 KLHL8Q9P2G9 620 aaPredicted RBP17.04■□□□□ 0.32
HOXB3-205ENST00000470495 IQANK1A0A1B0GTG1 560 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 CYB561D2O14569 222 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 RAP1GDS1P52306 607 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 ELF3P78545 371 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 OGDHQ02218 1023 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 HASPINQ8TF76 798 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 CAPSLQ8WWF8 208 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SLC13A1Q9BZW2 595 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 GID8Q9NWU2 228 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 FAM47DPA6NHR8 397 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SYCE1LA8MT33 242 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 KPNA7A9QM74 516 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 RGS2P41220 211 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 ENPEPQ07075 957 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 MFSD14CQ5VZR4 134 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 AGAP3Q96P47 875 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 FOXP3Q9BZS1 431 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 DCTN4Q9UJW0 460 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 NR1H3Q13133 447 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 EIF2B5Q13144 721 aaKnown RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 LRRC38Q5VT99 294 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 XYLT1Q86Y38 959 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 CDKL3Q8IVW4 592 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 DEPDC1BQ8WUY9 529 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 ZFYVE28Q9HCC9 887 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
HOXB3-205ENST00000470495 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
HOXB3-205ENST00000470495 TRAPPC3O43617 180 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 CCDC166P0CW27 439 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 PRKACAP17612 351 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 SLC7A14Q8TBB6 771 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 TMCC3Q9ULS5 477 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 NRCAMQ92823 1304 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.32
HOXB3-205ENST00000470495 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 SH3PXD2AQ5TCZ1 1133 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 HERPUD2Q9BSE4 406 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
HOXB3-205ENST00000470495 ADGRA2Q96PE1 1338 aa17.02■□□□□ 0.32
HOXB3-205ENST00000470495 MAGEA13PA6NCF6 341 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 GJA5P36382 358 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 BCAT1P54687 386 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 POU5F1Q01860 360 aaKnown RBP17.02■□□□□ 0.31
HOXB3-205ENST00000470495 DNAJC3Q13217 504 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 CYP1B1Q16678 543 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 RFX8Q6ZV50 586 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 ALLCQ8N6M5 410 aa17.02■□□□□ 0.31
HOXB3-205ENST00000470495 ARHGAP10A1A4S6 786 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 TREHO43280 583 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 IFNA8P32881 189 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 SDCBP2Q9H190 292 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 SIPA1L1O43166 1804 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 H0YC42 278 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 M0QYT0 321 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 TKTP29401 623 aaKnown RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 THPOP40225 353 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 SERPINB8P50452 374 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 DCTN2Q13561 401 aaKnown RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 CEP41Q9BYV8 373 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 PCDHGC3Q9UN70 934 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 FOCADQ5VW36 1801 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 SNTNA6NMZ2 147 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 BOLA2-SMG1P6H3BVE0 249 aa17.01■□□□□ 0.31
HOXB3-205ENST00000470495 SHOX2O60902 331 aaPredicted RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 ENDOUP21128 410 aaKnown RBP17.01■□□□□ 0.31
HOXB3-205ENST00000470495 GRM5P41594 1212 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms