RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-204ENST00000470191 IGLV3-19P01714 112 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 ITGAVP06756 1048 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 CTSKP43235 329 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 GRIA4P48058 902 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 ZNF132P52740 706 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 ASIC1P78348 528 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 CFHR1Q03591 330 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 ENPP2Q13822 863 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 TAF1BQ53T94 588 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-204ENST00000470191 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 CLEC20AQ6ZU45 233 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 GPR155Q7Z3F1 870 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 OR2T3Q8NH03 318 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 PLEKHO2Q8TD55 490 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 BAP1Q92560 729 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 SLC6A18Q96N87 628 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 BTBD1Q9H0C5 482 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-204ENST00000470191 MTG2Q9H4K7 406 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 CSNK1G1Q9HCP0 422 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 AGO1Q9UL18 857 aaKnown RBP9.57□□□□□ -0.88
CCDC171-204ENST00000470191 ASXL3Q9C0F0 2248 aa9.57□□□□□ -0.88
CCDC171-204ENST00000470191 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
CCDC171-204ENST00000470191 KALRNO60229 2985 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 SLC12A8A0AV02 714 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 LRRIQ3A6PVS8 624 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-204ENST00000470191 HHLA1C9JL84 531 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 E9PAM4 449 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 BRINP1O60477 761 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 EXOC3O60645 756 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 VNN1O95497 513 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
CCDC171-204ENST00000470191 DNTTP04053 509 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 RALAP11233 206 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 KRT10P13645 584 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CD27P26842 260 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CASP1P29466 404 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CHKAP35790 457 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 BCAT1P54687 386 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 RPS14P62263 151 aaKnown RBP9.56□□□□□ -0.88
CCDC171-204ENST00000470191 NCOA4Q13772 614 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CHST9Q7L1S5 443 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 SCD5Q86SK9 330 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CYFIP2Q96F07 1278 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 ACE2Q9BYF1 805 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-204ENST00000470191 PCED1AQ9H1Q7 454 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 AASDHPPTQ9NRN7 309 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 ZNF510Q9Y2H8 683 aa9.56□□□□□ -0.88
CCDC171-204ENST00000470191 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 A0A1B0GTQ1 180 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 EIF3DO15371 548 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC171-204ENST00000470191 WNT1P04628 370 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 NEFLP07196 543 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 CD58P19256 250 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 COG7P83436 770 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 BNIP3Q12983 259 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 CAMK2GQ13555 558 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-204ENST00000470191 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
CCDC171-204ENST00000470191 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-204ENST00000470191 TWNKQ96RR1 684 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 LGMNQ99538 433 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 DCLK3Q9C098 648 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 PRSS16Q9NQE7 514 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 ABCB8Q9NUT2 735 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 PLA2G4CQ9UP65 541 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
CCDC171-204ENST00000470191 KNL1Q8NG31 2342 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 TEX51A0A1B0GUA7 166 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 IGHV4-34P06331 123 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 P4HA1P13674 534 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 GLDCP23378 1020 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 PIK3CAP42336 1068 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 ACADVLP49748 655 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 KIF11P52732 1056 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 DLG4P78352 724 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 LY6DQ14210 128 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 EIF4HQ15056 248 aaKnown RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 RABEP1Q15276 862 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 E2F5Q15329 346 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 SHBQ15464 509 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 ARHGAP40Q5TG30 622 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 KLHDC10Q6PID8 442 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 SPACA3Q8IXA5 215 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 CRYBG2Q8N1P7 616 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 RBBP8NLQ8NC74 664 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 PARD3BQ8TEW8 1205 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 FGF11Q92914 225 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms