RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 E2F1Q01094 437 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 ARID5AQ03989 594 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 SURF1Q15526 300 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 WDR72Q3MJ13 1102 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
LSM2-209ENST00000470083 TRAPPC11Q7Z392 1133 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 WDR49Q8IV35 697 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 MED10Q9BTT4 135 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 TMEM245Q9H330 911 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 PCIF1Q9H4Z3 704 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 KRT82Q9NSB4 513 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 ZNF510Q9Y2H8 683 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
LSM2-209ENST00000470083 A0A1W2PR77 199 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 KIAA0391O15091 583 aaKnown RBP12.6□□□□□ -0.39
LSM2-209ENST00000470083 MDM4O15151 490 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 AP1G2O75843 785 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 GCNT3O95395 438 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 KLKB1P03952 638 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 CD38P28907 300 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 LSSP48449 732 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 GABREP78334 506 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 KIAA1614Q5VZ46 1190 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 ZNF574Q6ZN55 896 aaPredicted RBP12.6□□□□□ -0.39
LSM2-209ENST00000470083 KANSL1Q7Z3B3 1105 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 ZMIZ2Q8NF64 920 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 RASSF8Q8NHQ8 419 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 GOLGA1Q92805 767 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 SLC2A11Q9BYW1 496 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 THSD1Q9NS62 852 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 ANKMY1Q9P2S6 941 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 CLEC4EQ9ULY5 219 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 SCML2Q9UQR0 700 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
LSM2-209ENST00000470083 TLN1Q9Y490 2541 aaKnown RBP12.59□□□□□ -0.39
LSM2-209ENST00000470083 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 CYP26A1O43174 497 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
LSM2-209ENST00000470083 CYBBP04839 570 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 GAP43P17677 238 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 CASP5P51878 434 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 NXPH1P58417 271 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 BNIP3Q12983 259 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 ALCAMQ13740 583 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 FNDC3BQ53EP0 1204 aaKnown RBP12.59□□□□□ -0.39
LSM2-209ENST00000470083 C10orf120Q5SQS8 335 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 ATG14Q6ZNE5 492 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 USP30Q70CQ3 517 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 CBWD2Q8IUF1 395 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 OXR1Q8N573 874 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 ZNF366Q8N895 744 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 SMOQ99835 787 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 EBF2Q9HAK2 575 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 PRSS16Q9NQE7 514 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 AASDHPPTQ9NRN7 309 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
LSM2-209ENST00000470083 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
LSM2-209ENST00000470083 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 BEST1O76090 585 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 STAU1O95793 577 aaKnown RBP12.58□□□□□ -0.4
LSM2-209ENST00000470083 RARGP13631 454 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 PDE4CQ08493 712 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 CDCP2Q5VXM1 449 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 ZNF776Q68DI1 518 aaPredicted RBP12.58□□□□□ -0.4
LSM2-209ENST00000470083 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 TADA2BQ86TJ2 420 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 VCPIP1Q96JH7 1222 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
LSM2-209ENST00000470083 DCLK3Q9C098 648 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 SCML1Q9UN30 329 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 PLA2G4CQ9UP65 541 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 MYLKQ15746 1914 aa12.58□□□□□ -0.4
LSM2-209ENST00000470083 A0A1W2PQH9 124 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 TLR4O00206 839 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 USP12O75317 370 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 GP1BBP13224 206 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 CORO1AP31146 461 aaKnown RBP12.57□□□□□ -0.4
LSM2-209ENST00000470083 GALCP54803 685 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 MAP3K7CLP57077 242 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 SKOR1P84550 965 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms