RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TMEM120AQ9BXJ8 343 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 TRIM55Q9BYV6 548 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
CBWD3-205ENST00000469687 PCMTD2Q9NV79 361 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 HEY2Q9UBP5 337 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 PLLPQ9Y342 182 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 WDR27A2RRH5 827 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 FAM159BA6NKW6 160 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 CREB3O43889 395 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 DLDP09622 509 aaKnown RBP15.15■□□□□ 0.02
CBWD3-205ENST00000469687 AXLP30530 894 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 ARL4AP40617 200 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 AP1B1Q10567 949 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 NME3Q13232 169 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 EFHC1Q5JVL4 640 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
CBWD3-205ENST00000469687 ADAM32Q8TC27 787 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 LRRC39Q96DD0 335 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 DUSP16Q9BY84 665 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 PCDHA11Q9Y5I1 949 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 SHROOM3Q8TF72 1996 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 A0A0A0MRY4 1105 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 ATP5HO75947 161 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 AMHP03971 560 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 EZRP15311 586 aaKnown RBP15.15■□□□□ 0.02
CBWD3-205ENST00000469687 SERPINB3P29508 390 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 PNPLA4P41247 253 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 OLIG2Q13516 323 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 BSPRYQ5W0U4 402 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 SPRYD7Q5W111 196 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 TWF2Q6IBS0 349 aaKnown RBP15.15■□□□□ 0.02
CBWD3-205ENST00000469687 CLEC20AQ6ZU45 233 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 COLGALT1Q8NBJ5 622 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF398Q8TD17 642 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 SPATA13Q96N96 652 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 HNRNPABQ99729 332 aaKnown RBP15.15■□□□□ 0.02
CBWD3-205ENST00000469687 PIGVQ9NUD9 493 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 IL1RAPL1Q9NZN1 696 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 SEPT10Q9P0V9 454 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
CBWD3-205ENST00000469687 FAM237BA0A1B0GVD1 139 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 M0QYT0 321 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 HAS3O00219 553 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 RNF103O00237 685 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 NRP1O14786 923 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 ANP32DO95626 131 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 NPR3P17342 541 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 GM2AP17900 193 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 CCNFP41002 786 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 ARFIP2P53365 341 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 MAP3K7CLP57077 242 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 SESN2P58004 480 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 PCBP1Q15365 356 aaKnown RBP eCLIP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 MDH1BQ5I0G3 518 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 CASC4Q6P4E1 433 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FAM13CQ8NE31 585 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 DEPDC1BQ8WUY9 529 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 P2RY11Q96G91 374 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 TNIP3Q96KP6 325 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 RAB3IPQ96QF0 476 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 MIPEPQ99797 713 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 ANLNQ9NQW6 1124 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 ARL8BQ9NVJ2 186 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 ZNF236Q9UL36 1845 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FAM72CH0Y354 149 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 I6L893 689 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 DAB1O75553 588 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 PTPN1P18031 435 aaKnown RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 WARSP23381 471 aaKnown RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 PSMB4P28070 264 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 MORN1Q5T089 497 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FAM72AQ5TYM5 149 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FAM72DQ6L9T8 149 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 C4orf22Q6V702 233 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 LONP2Q86WA8 852 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FAM72BQ86X60 149 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 NDUFAF2Q8N183 169 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 FBXO41Q8TF61 875 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 INPP5DQ92835 1189 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 SKA1Q96BD8 255 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 NPY6RQ99463 290 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 XAB2Q9HCS7 855 aaKnown RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 TMEM30AQ9NV96 361 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 MOCS1Q9NZB8 636 aa15.14■□□□□ 0.01
CBWD3-205ENST00000469687 TIMM13Q9Y5L4 95 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-205ENST00000469687 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.13■□□□□ 0.01
CBWD3-205ENST00000469687 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 XPOTO43592 962 aaKnown RBP15.13■□□□□ 0.01
CBWD3-205ENST00000469687 FYNP06241 537 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 RPSAP08865 295 aaKnown RBP15.13■□□□□ 0.01
CBWD3-205ENST00000469687 RARBP10826 455 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 MYL2P10916 166 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 MGAT1P26572 445 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 CACNA2D1P54289 1103 aa15.13■□□□□ 0.01
CBWD3-205ENST00000469687 IRX4P78413 519 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms