RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 SYT13Q7L8C5 426 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 TERB1Q8NA31 727 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 ZBTB44Q8NCP5 570 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 MSANTD4Q8NCY6 345 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 DDI1Q8WTU0 396 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 ATRIPQ8WXE1 791 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 CPA5Q8WXQ8 436 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 BAP1Q92560 729 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 SLC39A13Q96H72 371 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 SEMA4AQ9H3S1 761 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 FAM204AQ9H8W3 233 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 FBXO10Q9UK96 956 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 MYO6Q9UM54 1294 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 SLC8A2Q9UPR5 921 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 SPTBN4Q9H254 2564 aa10.12□□□□□ -0.79
SRRT-208ENST00000469602 FAM170AA1A519 330 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 ANTXRLA6NF34 631 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 IRAK2O43187 625 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 ACSL4O60488 711 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 TSPAN3O60637 253 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 LILRB5O75023 590 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 DAB1O75553 588 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 APOEP02649 317 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 CCDC172P0C7W6 258 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 FERP16591 822 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 MMP8P22894 467 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 NOS2P35228 1153 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 TIE1P35590 1138 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 SCNN1AP37088 669 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 MATKP42679 507 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 DMWDQ09019 674 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 EIF4EBP2Q13542 120 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 DMC1Q14565 340 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 NFKBIBQ15653 356 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 HSF5Q4G112 596 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 MPPE1Q53F39 396 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 FAM102AQ5T9C2 384 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 XYLT1Q86Y38 959 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 ALLCQ8N6M5 410 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 IL17RCQ8NAC3 791 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 NKD2Q969F2 451 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 SLC2A11Q9BYW1 496 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 POLR3BQ9NW08 1133 aaPredicted RBP10.11□□□□□ -0.79
SRRT-208ENST00000469602 DDIT4Q9NX09 232 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 MMP17Q9ULZ9 603 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 SLC27A6Q9Y2P4 619 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
SRRT-208ENST00000469602 SDK1Q7Z5N4 2213 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 SYNJ2BP-COX16A0A087WUM0 186 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 GOLGA6L7A0A1B0GV03 622 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 KCNU1A8MYU2 1149 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 SLC2A3P11169 496 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 UNGP13051 313 aaPredicted RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 HOXC13P31276 330 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 SLC6A4P31645 630 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 GBP1P32455 592 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 NSFP46459 744 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 FNTBP49356 437 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 MRE11P49959 708 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 UBASH3AP57075 661 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 RNASE9P60153 205 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 CENPCQ03188 943 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 CLEC16AQ2KHT3 1053 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 C2CD6Q53TS8 623 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 ZC3H12AQ5D1E8 599 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 MPP7Q5T2T1 576 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 EMC10Q5UCC4 262 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 PIK3R6Q5UE93 754 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 HEATR6Q6AI08 1181 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 MMS22LQ6ZRQ5 1243 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 TRMT11Q7Z4G4 463 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 IRF2BP2Q7Z5L9 587 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 LONP2Q86WA8 852 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 CCDC33Q8N5R6 958 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 CAMKK1Q8N5S9 505 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 ZNF513Q8N8E2 541 aaPredicted RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 SLC30A5Q8TAD4 765 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 HHIPQ96QV1 700 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 PCDHB18PQ96TA0 734 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 NPY6RQ99463 290 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 AGPAT1Q99943 283 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 DDX50Q9BQ39 737 aaKnown RBP10.1□□□□□ -0.79
SRRT-208ENST00000469602 EDEM3Q9BZQ6 932 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 TTYH3Q9C0H2 523 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
SRRT-208ENST00000469602 RRN3Q9NYV6 651 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms